RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 TXNP10599 105 aaKnown RBP14.28□□□□□ -0.12
SNHG4-202ENST00000505522 CYP2C9P11712 490 aa14.28□□□□□ -0.12
SNHG4-202ENST00000505522 NT5C2P49902 561 aa14.28□□□□□ -0.12
SNHG4-202ENST00000505522 NBPF20Q3BBV1 942 aa14.28□□□□□ -0.12
SNHG4-202ENST00000505522 ASPRV1Q53RT3 343 aa14.28□□□□□ -0.12
SNHG4-202ENST00000505522 USP38Q8NB14 1042 aa14.28□□□□□ -0.12
SNHG4-202ENST00000505522 SYTL5Q8TDW5 730 aaPredicted RBP14.28□□□□□ -0.12
SNHG4-202ENST00000505522 TAAR1Q96RJ0 339 aa14.28□□□□□ -0.12
SNHG4-202ENST00000505522 JMJD4Q9H9V9 463 aa14.28□□□□□ -0.12
SNHG4-202ENST00000505522 ABCB11O95342 1321 aa14.27□□□□□ -0.12
SNHG4-202ENST00000505522 A6NJR5 290 aa14.27□□□□□ -0.13
SNHG4-202ENST00000505522 PARP1P09874 1014 aaKnown RBP14.27□□□□□ -0.13
SNHG4-202ENST00000505522 PDE4AP27815 886 aa14.27□□□□□ -0.13
SNHG4-202ENST00000505522 QRICH1Q2TAL8 776 aa14.27□□□□□ -0.13
SNHG4-202ENST00000505522 FAM47CQ5HY64 1035 aa14.27□□□□□ -0.13
SNHG4-202ENST00000505522 KRT23Q9C075 422 aa14.27□□□□□ -0.13
SNHG4-202ENST00000505522 PRDM12Q9H4Q4 367 aa14.27□□□□□ -0.13
SNHG4-202ENST00000505522 VAT1LQ9HCJ6 419 aa14.27□□□□□ -0.13
SNHG4-202ENST00000505522 GPHNQ9NQX3 736 aaPredicted RBP14.27□□□□□ -0.13
SNHG4-202ENST00000505522 CTNNA3Q9UI47 895 aa14.27□□□□□ -0.13
SNHG4-202ENST00000505522 YBX2Q9Y2T7 364 aaKnown RBP14.27□□□□□ -0.13
SNHG4-202ENST00000505522 SCN10AQ9Y5Y9 1956 aa14.27□□□□□ -0.13
SNHG4-202ENST00000505522 RAD50Q92878 1312 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 B4DLN1 442 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 DHX16O60231 1041 aaKnown RBP14.26□□□□□ -0.13
SNHG4-202ENST00000505522 SUPT20HL2P0C7V6 817 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 GSPT1P15170 499 aaKnown RBP14.26□□□□□ -0.13
SNHG4-202ENST00000505522 MRPL12P52815 198 aaKnown RBP14.26□□□□□ -0.13
SNHG4-202ENST00000505522 TTLL4Q14679 1199 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 RAB30Q15771 203 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 BRDTQ58F21 947 aaPredicted RBP14.26□□□□□ -0.13
SNHG4-202ENST00000505522 CCDC62Q6P9F0 684 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 SEPT14Q6ZU15 432 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 CYB5R4Q7L1T6 521 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 FBXO11Q86XK2 927 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 RPUSD2Q8IZ73 545 aaKnown RBP14.26□□□□□ -0.13
SNHG4-202ENST00000505522 STAG2Q8N3U4 1231 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 MTIF3Q9H2K0 278 aaKnown RBP14.26□□□□□ -0.13
SNHG4-202ENST00000505522 NKX2-4Q9H2Z4 354 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 MSRAQ9UJ68 235 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 CUL9Q8IWT3 2517 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 GBF1Q92538 1859 aa14.26□□□□□ -0.13
SNHG4-202ENST00000505522 SPTBN5Q9NRC6 3674 aaKnown RBP14.25□□□□□ -0.13
SNHG4-202ENST00000505522 KPNA6O60684 536 aa14.25□□□□□ -0.13
SNHG4-202ENST00000505522 RABGGTBP53611 331 aa14.25□□□□□ -0.13
SNHG4-202ENST00000505522 SEC23AQ15436 765 aa14.25□□□□□ -0.13
SNHG4-202ENST00000505522 LY6KQ17RY6 165 aa14.25□□□□□ -0.13
SNHG4-202ENST00000505522 IFIT1BQ5T764 474 aaKnown RBP14.25□□□□□ -0.13
SNHG4-202ENST00000505522 TTC22Q5TAA0 569 aa14.25□□□□□ -0.13
SNHG4-202ENST00000505522 NFRKBQ6P4R8 1299 aa14.25□□□□□ -0.13
SNHG4-202ENST00000505522 NSUN6Q8TEA1 469 aaKnown RBP14.25□□□□□ -0.13
SNHG4-202ENST00000505522 RMDN3Q96TC7 470 aa14.25□□□□□ -0.13
SNHG4-202ENST00000505522 UBAC1Q9BSL1 405 aa14.25□□□□□ -0.13
SNHG4-202ENST00000505522 MAF1Q9H063 256 aa14.25□□□□□ -0.13
SNHG4-202ENST00000505522 MRPL11Q9Y3B7 192 aaKnown RBP14.25□□□□□ -0.13
SNHG4-202ENST00000505522 CHD7Q9P2D1 2997 aa14.25□□□□□ -0.13
SNHG4-202ENST00000505522 SCN5AQ14524 2016 aa14.24□□□□□ -0.13
SNHG4-202ENST00000505522 OPLAHO14841 1288 aa14.24□□□□□ -0.13
SNHG4-202ENST00000505522 MYOGP15173 224 aa14.24□□□□□ -0.13
SNHG4-202ENST00000505522 ARHGAP1Q07960 439 aa14.24□□□□□ -0.13
SNHG4-202ENST00000505522 DEFB128Q7Z7B8 93 aa14.24□□□□□ -0.13
SNHG4-202ENST00000505522 MCF2L2Q86YR7 1114 aa14.24□□□□□ -0.13
SNHG4-202ENST00000505522 AFG1LQ8WV93 481 aa14.24□□□□□ -0.13
SNHG4-202ENST00000505522 GAS2L1Q99501 681 aaPredicted RBP14.24□□□□□ -0.13
SNHG4-202ENST00000505522 SLC4A7Q9Y6M7 1214 aa14.24□□□□□ -0.13
SNHG4-202ENST00000505522 MYH6P13533 1939 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 ZBBXA8MT70 800 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 PPP1R11O60927 126 aaPredicted RBP14.23□□□□□ -0.13
SNHG4-202ENST00000505522 GH1P01241 217 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 MMP3P08254 477 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 CHMP4BP1P59074 171 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 PTPN11Q06124 597 aaPredicted RBP14.23□□□□□ -0.13
SNHG4-202ENST00000505522 ADGRE1Q14246 886 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 STXBP2Q15833 593 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 ARHGEF16Q5VV41 709 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 CHST3Q7LGC8 479 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 PPM1EQ8WY54 764 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 MTMR8Q96EF0 704 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 IWS1Q96ST2 819 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 PRDM6Q9NQX0 595 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 MAD2L2Q9UI95 211 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 SUPT16HQ9Y5B9 1047 aaKnown RBP14.23□□□□□ -0.13
SNHG4-202ENST00000505522 KIAA1217Q5T5P2 1943 aa14.23□□□□□ -0.13
SNHG4-202ENST00000505522 KLRF2D3W0D1 207 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 CFBP00751 764 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 PFKMP08237 780 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 EIF2AK2P19525 551 aaKnown RBP14.22□□□□□ -0.13
SNHG4-202ENST00000505522 HSD17B4P51659 736 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 PTH1RQ03431 593 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 SLC35G1Q2M3R5 365 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 KAT2BQ92831 832 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 AMNQ9BXJ7 453 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 SLC28A3Q9HAS3 691 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 SENP2Q9HC62 589 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 PXMP2Q9NR77 195 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 DDX41Q9UJV9 622 aaKnown RBP14.22□□□□□ -0.13
SNHG4-202ENST00000505522 TAF6LQ9Y6J9 622 aa14.22□□□□□ -0.13
SNHG4-202ENST00000505522 TANC1Q9C0D5 1861 aa14.21□□□□□ -0.13
SNHG4-202ENST00000505522 PALM3A6NDB9 673 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms