RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 LOC102724428A0A0B4J2F2 783 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 ZSCAN5CA6NGD5 496 aaPredicted RBP13.21□□□□□ -0.29
UBE3D-206ENST00000505226 TACC1O75410 805 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 OR52Z1P0C646 297 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 PRLRP16471 622 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 SIK1P57059 783 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 GFPT1Q06210 699 aaPredicted RBP13.21□□□□□ -0.29
UBE3D-206ENST00000505226 ASTE1Q2TB18 679 aaPredicted RBP13.21□□□□□ -0.29
UBE3D-206ENST00000505226 C12orf60Q5U649 245 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 CAPS2Q9BXY5 557 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 TSGA10Q9BZW7 698 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 ITIH3Q06033 890 aa13.21□□□□□ -0.3
UBE3D-206ENST00000505226 PPFIA1Q13136 1202 aa13.21□□□□□ -0.3
UBE3D-206ENST00000505226 SF3B3Q15393 1217 aaKnown RBP13.21□□□□□ -0.3
UBE3D-206ENST00000505226 RRAGAQ7L523 313 aa13.21□□□□□ -0.3
UBE3D-206ENST00000505226 ANKS1AQ92625 1134 aa13.21□□□□□ -0.3
UBE3D-206ENST00000505226 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.3
UBE3D-206ENST00000505226 DOT1LQ8TEK3 1739 aa13.21□□□□□ -0.3
UBE3D-206ENST00000505226 MYMKA6NI61 221 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 BUB1O43683 1085 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 FAM153BP0C7A2 387 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 FAM153CQ494X1 144 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 KLHDC7AQ5VTJ3 777 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 TADA2BQ86TJ2 420 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 EFCAB13Q8IY85 973 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 SH2D3CQ8N5H7 860 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 BCAS4Q8TDM0 211 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 TCP11L1Q9NUJ3 509 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 BLOC1S4Q9NUP1 217 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 FAM153AQ9UHL3 310 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 PALM3A6NDB9 673 aaPredicted RBP13.2□□□□□ -0.3
UBE3D-206ENST00000505226 LAD1O00515 517 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 EIF3HO15372 352 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBE3D-206ENST00000505226 CPP00450 1065 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 GLI1P08151 1106 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 GNGT1P63211 74 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 RASSF7Q02833 373 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 ICE2Q659A1 982 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 TMED8Q6PL24 325 aaPredicted RBP13.2□□□□□ -0.3
UBE3D-206ENST00000505226 FAM114A1Q8IWE2 563 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 CUEDC2Q9H467 287 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 STIM2Q9P246 746 aa13.2□□□□□ -0.3
UBE3D-206ENST00000505226 USO1O60763 962 aaKnown RBP13.19□□□□□ -0.3
UBE3D-206ENST00000505226 ZPR1O75312 459 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 KRT14P02533 472 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 SLC1A4P43007 532 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 SEMA3FQ13275 785 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 GRB10Q13322 594 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 TRADDQ15628 312 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 GRIK5Q16478 980 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 HGSNATQ68CP4 663 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 IQCEQ6IPM2 695 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 TMEM47Q9BQJ4 181 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 ZMYND12Q9H0C1 365 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 SAMM50Q9Y512 469 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 FAM169AQ9Y6X4 670 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 CASZ1Q86V15 1759 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 ESYT3A0FGR9 886 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 EDIL3O43854 480 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 AKR1B10O60218 316 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 LIG3P49916 1009 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 BICDL1Q6ZP65 573 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 DYMQ7RTS9 669 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 SH3RF3Q8TEJ3 882 aaPredicted RBP13.19□□□□□ -0.3
UBE3D-206ENST00000505226 ZIM3Q96PE6 472 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 HYOU1Q9Y4L1 999 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 HIBADHP31937 336 aaKnown RBP13.19□□□□□ -0.3
UBE3D-206ENST00000505226 CARSP49589 748 aaKnown RBP13.19□□□□□ -0.3
UBE3D-206ENST00000505226 APBA1Q02410 837 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 KCTD16Q68DU8 428 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 MICALL1Q8N3F8 863 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 AK8Q96MA6 479 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 PNMA5Q96PV4 448 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 NUDT12Q9BQG2 462 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 STX8Q9UNK0 236 aa13.19□□□□□ -0.3
UBE3D-206ENST00000505226 A0A087WUV0 522 aaPredicted RBP13.18□□□□□ -0.3
UBE3D-206ENST00000505226 MAGEA1P43355 309 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 LRRC41Q15345 812 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 DEF6Q9H4E7 631 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 MAGEF1Q9HAY2 307 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 TMEM260Q9NX78 707 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 KLRF2D3W0D1 207 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 PJA2O43164 708 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 TLR2O60603 784 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 TCP1P17987 556 aaKnown RBP13.18□□□□□ -0.3
UBE3D-206ENST00000505226 EPHB4P54760 987 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 KCNQ4P56696 695 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 PDCLQ13371 301 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 KCTD19Q17RG1 926 aaPredicted RBP13.18□□□□□ -0.3
UBE3D-206ENST00000505226 COBLL1Q53SF7 1204 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 CNNM4Q6P4Q7 775 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 LRRC55Q6ZSA7 311 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 PIK3R5Q8WYR1 880 aa13.18□□□□□ -0.3
UBE3D-206ENST00000505226 SMCO2A6NFE2 343 aa13.17□□□□□ -0.3
UBE3D-206ENST00000505226 GOLGA8KD6RF30 607 aa13.17□□□□□ -0.3
UBE3D-206ENST00000505226 EPB41P11171 864 aaKnown RBP13.17□□□□□ -0.3
UBE3D-206ENST00000505226 TXKP42681 527 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms