RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 FAM227BQ96M60 508 aa18.88■□□□□ 0.61
PDLIM7-213ENST00000505074 TRERF1Q96PN7 1200 aa18.88■□□□□ 0.61
PDLIM7-213ENST00000505074 DDX49Q9Y6V7 483 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-213ENST00000505074 SCN10AQ9Y5Y9 1956 aa18.88■□□□□ 0.61
PDLIM7-213ENST00000505074 A0A0D9SFI3 127 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 MYL3P08590 195 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 LCTP09848 1927 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 ALAS1P13196 640 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 SIP14410 1827 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 SNAP25P60880 206 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 PURAQ00577 322 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 NHLH1Q02575 133 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 LEXMQ3ZCV2 418 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 DUSP28Q4G0W2 176 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 MCMDC2Q4G0Z9 681 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 SPRED2Q7Z698 418 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 SNX27Q96L92 541 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 MTG1Q9BT17 334 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 ZBED2Q9BTP6 218 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 KCNH6Q9H252 994 aa18.87■□□□□ 0.61
PDLIM7-213ENST00000505074 ZNF536O15090 1300 aa18.86■□□□□ 0.61
PDLIM7-213ENST00000505074 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-213ENST00000505074 NMIQ13287 307 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-213ENST00000505074 BFSP2Q13515 415 aa18.86■□□□□ 0.61
PDLIM7-213ENST00000505074 RASGRP2Q7LDG7 609 aa18.86■□□□□ 0.61
PDLIM7-213ENST00000505074 RWDD1Q9H446 243 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-213ENST00000505074 IL17RBQ9NRM6 502 aa18.86■□□□□ 0.61
PDLIM7-213ENST00000505074 CYP39A1Q9NYL5 469 aa18.86■□□□□ 0.61
PDLIM7-213ENST00000505074 ANAPC4Q9UJX5 808 aa18.86■□□□□ 0.61
PDLIM7-213ENST00000505074 NBPF20Q3BBV1 942 aa18.85■□□□□ 0.61
PDLIM7-213ENST00000505074 BRDTQ58F21 947 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-213ENST00000505074 RCSD1Q6JBY9 416 aa18.85■□□□□ 0.61
PDLIM7-213ENST00000505074 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-213ENST00000505074 WDR11Q9BZH6 1224 aa18.85■□□□□ 0.61
PDLIM7-213ENST00000505074 NOD1Q9Y239 953 aa18.85■□□□□ 0.61
PDLIM7-213ENST00000505074 LCHNA4D1U4 455 aa18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 ORC4O43929 436 aa18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 KCNA5P22460 613 aa18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 HAND2P61296 217 aa18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 PTPN11Q06124 597 aaPredicted RBP18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 ALX1Q15699 326 aa18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 NFRKBQ6P4R8 1299 aa18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 OR6J1Q8NGC5 347 aa18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 MORC4Q8TE76 937 aa18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 SUGCTQ9HAC7 445 aa18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 CCPG1Q9ULG6 757 aa18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 PRR12Q9ULL5 1215 aa18.84■□□□□ 0.61
PDLIM7-213ENST00000505074 CCDC171Q6TFL3 1326 aa18.83■□□□□ 0.61
PDLIM7-213ENST00000505074 RAD50Q92878 1312 aa18.83■□□□□ 0.61
PDLIM7-213ENST00000505074 FGAP02671 866 aa18.83■□□□□ 0.6
PDLIM7-213ENST00000505074 HSPD1P10809 573 aaKnown RBP18.83■□□□□ 0.6
PDLIM7-213ENST00000505074 IL9P15248 144 aa18.83■□□□□ 0.6
PDLIM7-213ENST00000505074 WDR5P61964 334 aaKnown RBP18.83■□□□□ 0.6
PDLIM7-213ENST00000505074 PTCRAQ6ISU1 281 aaPredicted RBP18.83■□□□□ 0.6
PDLIM7-213ENST00000505074 NSMFQ6X4W1 530 aa18.83■□□□□ 0.6
PDLIM7-213ENST00000505074 ZNF589Q86UQ0 364 aaPredicted RBP18.83■□□□□ 0.6
PDLIM7-213ENST00000505074 DCAF4Q8WV16 495 aa18.83■□□□□ 0.6
PDLIM7-213ENST00000505074 FBXL18Q96ME1 805 aa18.83■□□□□ 0.6
PDLIM7-213ENST00000505074 ADD3Q9UEY8 706 aaKnown RBP18.83■□□□□ 0.6
PDLIM7-213ENST00000505074 MTUS1Q9ULD2 1270 aa18.83■□□□□ 0.6
PDLIM7-213ENST00000505074 FRMPD2Q68DX3 1309 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-213ENST00000505074 KPNA6O60684 536 aa18.82■□□□□ 0.6
PDLIM7-213ENST00000505074 MFAP1P55081 439 aaKnown RBP18.82■□□□□ 0.6
PDLIM7-213ENST00000505074 ERVK-21P61565 698 aa18.82■□□□□ 0.6
PDLIM7-213ENST00000505074 AAMPQ13685 434 aa18.82■□□□□ 0.6
PDLIM7-213ENST00000505074 PUS10Q3MIT2 529 aaKnown RBP18.82■□□□□ 0.6
PDLIM7-213ENST00000505074 MUM1L1Q5H9M0 696 aa18.82■□□□□ 0.6
PDLIM7-213ENST00000505074 CCDC155Q8N6L0 562 aa18.82■□□□□ 0.6
PDLIM7-213ENST00000505074 TGS1Q96RS0 853 aaKnown RBP18.82■□□□□ 0.6
PDLIM7-213ENST00000505074 DCXO43602 365 aa18.81■□□□□ 0.6
PDLIM7-213ENST00000505074 PLA2G6O60733 806 aa18.81■□□□□ 0.6
PDLIM7-213ENST00000505074 TOP1P11387 765 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-213ENST00000505074 SLC16A2P36021 539 aa18.81■□□□□ 0.6
PDLIM7-213ENST00000505074 TMCO2Q7Z6W1 182 aaPredicted RBP18.81■□□□□ 0.6
PDLIM7-213ENST00000505074 PPP1R13LQ8WUF5 828 aa18.81■□□□□ 0.6
PDLIM7-213ENST00000505074 RAD9AQ99638 391 aa18.81■□□□□ 0.6
PDLIM7-213ENST00000505074 GPCPD1Q9NPB8 672 aa18.81■□□□□ 0.6
PDLIM7-213ENST00000505074 LOC102724159A0A0B4J2E5 919 aa18.8■□□□□ 0.6
PDLIM7-213ENST00000505074 RBM47A0AV96 593 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-213ENST00000505074 GRXCR2A6NFK2 248 aa18.8■□□□□ 0.6
PDLIM7-213ENST00000505074 ALDH5A1P51649 535 aaPredicted RBP18.8■□□□□ 0.6
PDLIM7-213ENST00000505074 PWP2Q15269 919 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-213ENST00000505074 MFSD6Q6ZSS7 791 aa18.8■□□□□ 0.6
PDLIM7-213ENST00000505074 CHD1LQ86WJ1 897 aa18.8■□□□□ 0.6
PDLIM7-213ENST00000505074 CAGE1Q8TC20 777 aa18.8■□□□□ 0.6
PDLIM7-213ENST00000505074 AFAP1L1Q8TED9 768 aa18.8■□□□□ 0.6
PDLIM7-213ENST00000505074 PURBQ96QR8 312 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-213ENST00000505074 TMEM47Q9BQJ4 181 aa18.8■□□□□ 0.6
PDLIM7-213ENST00000505074 ZMYM6O95789 1325 aa18.79■□□□□ 0.6
PDLIM7-213ENST00000505074 NKRFO15226 690 aaKnown RBP eCLIP18.79■□□□□ 0.6
PDLIM7-213ENST00000505074 GJB5O95377 273 aa18.79■□□□□ 0.6
PDLIM7-213ENST00000505074 ICAM1P05362 532 aa18.79■□□□□ 0.6
PDLIM7-213ENST00000505074 DEFB103AP81534 67 aa18.79■□□□□ 0.6
PDLIM7-213ENST00000505074 SYDE2Q5VT97 1194 aa18.79■□□□□ 0.6
PDLIM7-213ENST00000505074 TTBK2Q6IQ55 1244 aa18.79■□□□□ 0.6
PDLIM7-213ENST00000505074 CNKSR3Q6P9H4 555 aa18.79■□□□□ 0.6
PDLIM7-213ENST00000505074 TICAM2Q86XR7 235 aa18.79■□□□□ 0.6
PDLIM7-213ENST00000505074 SMC5Q8IY18 1101 aa18.79■□□□□ 0.6
PDLIM7-213ENST00000505074 DIAPH3Q9NSV4 1193 aa18.79■□□□□ 0.6
PDLIM7-213ENST00000505074 POTEB3A0JP26 581 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms