RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 LRIT3Q3SXY7 679 aa23.29■■□□□ 1.32
HERC6-205ENST00000504905 LHX8Q68G74 356 aa23.29■■□□□ 1.32
HERC6-205ENST00000504905 HEATR3Q7Z4Q2 680 aa23.29■■□□□ 1.32
HERC6-205ENST00000504905 NCOA5Q9HCD5 579 aaKnown RBP23.29■■□□□ 1.32
HERC6-205ENST00000504905 COL20A1Q9P218 1284 aa23.29■■□□□ 1.32
HERC6-205ENST00000504905 DDX49Q9Y6V7 483 aaKnown RBP23.29■■□□□ 1.32
HERC6-205ENST00000504905 AKR1A1P14550 325 aa23.28■■□□□ 1.32
HERC6-205ENST00000504905 HOXA13P31271 388 aaPredicted RBP23.28■■□□□ 1.32
HERC6-205ENST00000504905 AK2P54819 239 aa23.28■■□□□ 1.32
HERC6-205ENST00000504905 STK3Q13188 491 aa23.28■■□□□ 1.32
HERC6-205ENST00000504905 ANO1Q5XXA6 986 aa23.28■■□□□ 1.32
HERC6-205ENST00000504905 MORC4Q8TE76 937 aa23.28■■□□□ 1.32
HERC6-205ENST00000504905 TAAR1Q96RJ0 339 aa23.28■■□□□ 1.32
HERC6-205ENST00000504905 RBM25P49756 843 aaKnown RBP23.27■■□□□ 1.32
HERC6-205ENST00000504905 PDE4DQ08499 809 aa23.27■■□□□ 1.32
HERC6-205ENST00000504905 NSUN6Q8TEA1 469 aaKnown RBP23.27■■□□□ 1.32
HERC6-205ENST00000504905 GPKOWQ92917 476 aaPredicted RBP eCLIP23.27■■□□□ 1.32
HERC6-205ENST00000504905 RMDN3Q96TC7 470 aa23.27■■□□□ 1.32
HERC6-205ENST00000504905 FAM184BQ9ULE4 1060 aa23.27■■□□□ 1.32
HERC6-205ENST00000504905 CPLX1O14810 134 aa23.26■■□□□ 1.31
HERC6-205ENST00000504905 RARBP10826 455 aa23.26■■□□□ 1.31
HERC6-205ENST00000504905 AKAP17AQ02040 695 aaKnown RBP23.26■■□□□ 1.31
HERC6-205ENST00000504905 ARHGEF16Q5VV41 709 aa23.26■■□□□ 1.31
HERC6-205ENST00000504905 WWC2Q6AWC2 1192 aa23.26■■□□□ 1.31
HERC6-205ENST00000504905 EEPD1Q7L9B9 569 aa23.26■■□□□ 1.31
HERC6-205ENST00000504905 FBXO16Q8IX29 292 aaPredicted RBP23.26■■□□□ 1.31
HERC6-205ENST00000504905 DEFB123Q8N688 67 aa23.26■■□□□ 1.31
HERC6-205ENST00000504905 CUL5Q93034 780 aa23.26■■□□□ 1.31
HERC6-205ENST00000504905 KATNBL1Q9H079 304 aa23.26■■□□□ 1.31
HERC6-205ENST00000504905 VTA1Q9NP79 307 aa23.26■■□□□ 1.31
HERC6-205ENST00000504905 TPCN1Q9ULQ1 816 aa23.26■■□□□ 1.31
HERC6-205ENST00000504905 hCG_1984214I3L0E3 225 aa23.25■■□□□ 1.31
HERC6-205ENST00000504905 IFNAR1P17181 557 aa23.25■■□□□ 1.31
HERC6-205ENST00000504905 SYN1P17600 705 aa23.25■■□□□ 1.31
HERC6-205ENST00000504905 MAGEA10P43363 369 aaPredicted RBP23.25■■□□□ 1.31
HERC6-205ENST00000504905 NTRK3Q16288 839 aa23.25■■□□□ 1.31
HERC6-205ENST00000504905 CCDC144BQ3MJ40 725 aa23.25■■□□□ 1.31
HERC6-205ENST00000504905 NOL8Q76FK4 1167 aaKnown RBP23.25■■□□□ 1.31
HERC6-205ENST00000504905 TDHQ8IZJ6 230 aa23.25■■□□□ 1.31
HERC6-205ENST00000504905 ZNF713Q8N859 430 aaPredicted RBP23.25■■□□□ 1.31
HERC6-205ENST00000504905 PHKBQ93100 1093 aa23.25■■□□□ 1.31
HERC6-205ENST00000504905 SLKQ9H2G2 1235 aaPredicted RBP23.25■■□□□ 1.31
HERC6-205ENST00000504905 PRPF3O43395 683 aaKnown RBP23.24■■□□□ 1.31
HERC6-205ENST00000504905 EIF2AK2P19525 551 aaKnown RBP23.24■■□□□ 1.31
HERC6-205ENST00000504905 EDNRBP24530 442 aa23.24■■□□□ 1.31
HERC6-205ENST00000504905 NAPAP54920 295 aa23.24■■□□□ 1.31
HERC6-205ENST00000504905 CPLX2Q6PUV4 134 aaKnown RBP23.24■■□□□ 1.31
HERC6-205ENST00000504905 FCHSD1Q86WN1 690 aa23.24■■□□□ 1.31
HERC6-205ENST00000504905 SMARCC2Q8TAQ2 1214 aa23.24■■□□□ 1.31
HERC6-205ENST00000504905 IWS1Q96ST2 819 aa23.24■■□□□ 1.31
HERC6-205ENST00000504905 SLC26A6Q9BXS9 759 aa23.24■■□□□ 1.31
HERC6-205ENST00000504905 RNF26Q9BY78 433 aaPredicted RBP23.24■■□□□ 1.31
HERC6-205ENST00000504905 PSTPIP2Q9H939 334 aa23.24■■□□□ 1.31
HERC6-205ENST00000504905 PXMP2Q9NR77 195 aa23.24■■□□□ 1.31
HERC6-205ENST00000504905 SCG2P13521 617 aa23.23■■□□□ 1.31
HERC6-205ENST00000504905 PFKFB3Q16875 520 aaPredicted RBP23.23■■□□□ 1.31
HERC6-205ENST00000504905 PPP1R18Q6NYC8 613 aa23.23■■□□□ 1.31
HERC6-205ENST00000504905 TRIM22Q8IYM9 498 aa23.23■■□□□ 1.31
HERC6-205ENST00000504905 LENG1Q96BZ8 264 aaPredicted RBP23.23■■□□□ 1.31
HERC6-205ENST00000504905 KIF2CQ99661 725 aa23.23■■□□□ 1.31
HERC6-205ENST00000504905 XPNPEP3Q9NQH7 507 aa23.23■■□□□ 1.31
HERC6-205ENST00000504905 BARHL2Q9NY43 387 aa23.23■■□□□ 1.31
HERC6-205ENST00000504905 STXBP3O00186 592 aa23.22■■□□□ 1.31
HERC6-205ENST00000504905 PIK3CDO00329 1044 aa23.22■■□□□ 1.31
HERC6-205ENST00000504905 PFKFB2O60825 505 aa23.22■■□□□ 1.31
HERC6-205ENST00000504905 PPFIA3O75145 1194 aa23.22■■□□□ 1.31
HERC6-205ENST00000504905 COL6A1P12109 1028 aa23.22■■□□□ 1.31
HERC6-205ENST00000504905 SSRP1Q08945 709 aaKnown RBP23.22■■□□□ 1.31
HERC6-205ENST00000504905 SCRN1Q12765 414 aa23.22■■□□□ 1.31
HERC6-205ENST00000504905 TAPT1Q6NXT6 567 aa23.22■■□□□ 1.31
HERC6-205ENST00000504905 USP17L6PQ6QN14 398 aa23.22■■□□□ 1.31
HERC6-205ENST00000504905 ARRDC4Q8NCT1 418 aa23.22■■□□□ 1.31
HERC6-205ENST00000504905 STXBP5LQ9Y2K9 1186 aa23.22■■□□□ 1.31
HERC6-205ENST00000504905 MEIS2O14770 477 aa23.21■■□□□ 1.31
HERC6-205ENST00000504905 DUSP11O75319 330 aaKnown RBP23.21■■□□□ 1.31
HERC6-205ENST00000504905 MYCNP04198 464 aaPredicted RBP23.21■■□□□ 1.31
HERC6-205ENST00000504905 ADCYAP1R1P41586 468 aa23.21■■□□□ 1.31
HERC6-205ENST00000504905 TNFAIP2Q03169 654 aa23.21■■□□□ 1.31
HERC6-205ENST00000504905 STXBP2Q15833 593 aa23.21■■□□□ 1.31
HERC6-205ENST00000504905 IQSEC1Q6DN90 963 aa23.21■■□□□ 1.31
HERC6-205ENST00000504905 Q7L0L9 218 aa23.21■■□□□ 1.31
HERC6-205ENST00000504905 UBE2OQ9C0C9 1292 aaKnown RBP23.21■■□□□ 1.31
HERC6-205ENST00000504905 PDGFCQ9NRA1 345 aa23.21■■□□□ 1.31
HERC6-205ENST00000504905 MTMR10Q9NXD2 777 aa23.21■■□□□ 1.31
HERC6-205ENST00000504905 KIAA1217Q5T5P2 1943 aa23.21■■□□□ 1.31
HERC6-205ENST00000504905 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.2■■□□□ 1.3
HERC6-205ENST00000504905 ADCY6O43306 1168 aa23.2■■□□□ 1.3
HERC6-205ENST00000504905 CDKL5O76039 1030 aa23.2■■□□□ 1.3
HERC6-205ENST00000504905 NR3C2P08235 984 aa23.2■■□□□ 1.3
HERC6-205ENST00000504905 PKN1Q16512 942 aa23.2■■□□□ 1.3
HERC6-205ENST00000504905 TYW1BQ6NUM6 668 aa23.2■■□□□ 1.3
HERC6-205ENST00000504905 PDCD2LQ9BRP1 358 aa23.2■■□□□ 1.3
HERC6-205ENST00000504905 BACH2Q9BYV9 841 aa23.2■■□□□ 1.3
HERC6-205ENST00000504905 KBTBD13C9JR72 458 aa23.19■■□□□ 1.3
HERC6-205ENST00000504905 DNM1LO00429 736 aa23.19■■□□□ 1.3
HERC6-205ENST00000504905 PGK1P00558 417 aa23.19■■□□□ 1.3
HERC6-205ENST00000504905 MYCLP12524 364 aaPredicted RBP23.19■■□□□ 1.3
HERC6-205ENST00000504905 ADCY7P51828 1080 aa23.19■■□□□ 1.3
HERC6-205ENST00000504905 PGM5Q15124 567 aa23.19■■□□□ 1.3
HERC6-205ENST00000504905 RABEP1Q15276 862 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms