RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 NT5C2P49902 561 aa14.92□□□□□ -0.02
RNF4-206ENST00000504782 CCL23P55773 120 aa14.92□□□□□ -0.02
RNF4-206ENST00000504782 ANTXR2P58335 489 aa14.92□□□□□ -0.02
RNF4-206ENST00000504782 PWP2Q15269 919 aaKnown RBP14.92□□□□□ -0.02
RNF4-206ENST00000504782 ZNF365Q70YC5 407 aa14.92□□□□□ -0.02
RNF4-206ENST00000504782 VWCEQ96DN2 955 aa14.92□□□□□ -0.02
RNF4-206ENST00000504782 GPHNQ9NQX3 736 aaPredicted RBP14.92□□□□□ -0.02
RNF4-206ENST00000504782 TRMT13Q9NUP7 481 aaKnown RBP14.92□□□□□ -0.02
RNF4-206ENST00000504782 PNMA2Q9UL42 364 aa14.92□□□□□ -0.02
RNF4-206ENST00000504782 PBX2P40425 430 aa14.91□□□□□ -0.02
RNF4-206ENST00000504782 PPIGQ13427 754 aaKnown RBP eCLIP14.91□□□□□ -0.024e-10■■□□□ 12.4
RNF4-206ENST00000504782 PPP2R5BQ15173 497 aa14.91□□□□□ -0.02
RNF4-206ENST00000504782 LY6KQ17RY6 165 aa14.91□□□□□ -0.02
RNF4-206ENST00000504782 CCDC62Q6P9F0 684 aa14.91□□□□□ -0.02
RNF4-206ENST00000504782 SEPT14Q6ZU15 432 aa14.91□□□□□ -0.02
RNF4-206ENST00000504782 TMEM199Q8N511 208 aa14.91□□□□□ -0.02
RNF4-206ENST00000504782 RUFY2Q8WXA3 655 aa14.91□□□□□ -0.02
RNF4-206ENST00000504782 MYLIPQ8WY64 445 aa14.91□□□□□ -0.02
RNF4-206ENST00000504782 MTMR8Q96EF0 704 aa14.91□□□□□ -0.02
RNF4-206ENST00000504782 NOC4LQ9BVI4 516 aaKnown RBP14.91□□□□□ -0.02
RNF4-206ENST00000504782 WNT8AQ9H1J5 351 aa14.91□□□□□ -0.02
RNF4-206ENST00000504782 ALDH8A1Q9H2A2 487 aaPredicted RBP14.91□□□□□ -0.02
RNF4-206ENST00000504782 HIPK3Q9H422 1215 aa14.91□□□□□ -0.02
RNF4-206ENST00000504782 CXXC1Q9P0U4 656 aaPredicted RBP14.91□□□□□ -0.02
RNF4-206ENST00000504782 IFIT3O14879 490 aaKnown RBP14.9□□□□□ -0.02
RNF4-206ENST00000504782 CYTH3O43739 400 aa14.9□□□□□ -0.02
RNF4-206ENST00000504782 CFBP00751 764 aa14.9□□□□□ -0.02
RNF4-206ENST00000504782 CYP2C9P11712 490 aa14.9□□□□□ -0.02
RNF4-206ENST00000504782 EIF2AK2P19525 551 aaKnown RBP14.9□□□□□ -0.02
RNF4-206ENST00000504782 NBPF20Q3BBV1 942 aa14.9□□□□□ -0.02
RNF4-206ENST00000504782 RASIP1Q5U651 963 aa14.9□□□□□ -0.02
RNF4-206ENST00000504782 SCFD2Q8WU76 684 aa14.9□□□□□ -0.02
RNF4-206ENST00000504782 MAP4K1Q92918 833 aa14.9□□□□□ -0.02
RNF4-206ENST00000504782 SCLYQ96I15 445 aa14.9□□□□□ -0.02
RNF4-206ENST00000504782 ZFP91Q96JP5 570 aaPredicted RBP14.9□□□□□ -0.02
RNF4-206ENST00000504782 RMDN3Q96TC7 470 aa14.9□□□□□ -0.02
RNF4-206ENST00000504782 MRPL11Q9Y3B7 192 aaKnown RBP14.9□□□□□ -0.02
RNF4-206ENST00000504782 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
RNF4-206ENST00000504782 EYSQ5T1H1 3165 aa14.9□□□□□ -0.02
RNF4-206ENST00000504782 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.89□□□□□ -0.03
RNF4-206ENST00000504782 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.89□□□□□ -0.03
RNF4-206ENST00000504782 A6NJR5 290 aa14.89□□□□□ -0.03
RNF4-206ENST00000504782 HOXA13P31271 388 aaPredicted RBP14.89□□□□□ -0.03
RNF4-206ENST00000504782 CPT1AP50416 773 aa14.89□□□□□ -0.03
RNF4-206ENST00000504782 TROAPQ12815 778 aa14.89□□□□□ -0.03
RNF4-206ENST00000504782 TRDNQ13061 729 aa14.89□□□□□ -0.03
RNF4-206ENST00000504782 GRM4Q14833 912 aa14.89□□□□□ -0.03
RNF4-206ENST00000504782 HOMER1Q86YM7 354 aa14.89□□□□□ -0.03
RNF4-206ENST00000504782 IGDCC4Q8TDY8 1250 aa14.89□□□□□ -0.03
RNF4-206ENST00000504782 NSUN6Q8TEA1 469 aaKnown RBP14.89□□□□□ -0.03
RNF4-206ENST00000504782 PIGSQ96S52 555 aa14.89□□□□□ -0.03
RNF4-206ENST00000504782 MTG1Q9BT17 334 aaPredicted RBP14.89□□□□□ -0.03
RNF4-206ENST00000504782 AMNQ9BXJ7 453 aa14.89□□□□□ -0.03
RNF4-206ENST00000504782 IL23AQ9NPF7 189 aa14.89□□□□□ -0.03
RNF4-206ENST00000504782 POLR3EQ9NVU0 708 aa14.89□□□□□ -0.03
RNF4-206ENST00000504782 RBM8AQ9Y5S9 174 aaKnown RBP14.89□□□□□ -0.03
RNF4-206ENST00000504782 TRIP12Q14669 1992 aaPredicted RBP14.88□□□□□ -0.03
RNF4-206ENST00000504782 ZBTB5O15062 677 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 NKRFO15226 690 aaKnown RBP eCLIP14.88□□□□□ -0.03
RNF4-206ENST00000504782 DNAJB2P25686 324 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 HSD17B4P51659 736 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 ARHGAP1Q07960 439 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 TTLL4Q14679 1199 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 GRIN2CQ14957 1233 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 WTAPQ15007 396 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 ARHGEF16Q5VV41 709 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 MCF2L2Q86YR7 1114 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 MB21D2Q8IYB1 491 aaPredicted RBP14.88□□□□□ -0.03
RNF4-206ENST00000504782 NCOA7Q8NI08 942 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 AFG1LQ8WV93 481 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 PIBF1Q8WXW3 757 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 MPHOSPH6Q99547 160 aaKnown RBP14.88□□□□□ -0.03
RNF4-206ENST00000504782 MYL10Q9BUA6 226 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 PBX4Q9BYU1 374 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 RIOX1Q9H6W3 641 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 PXMP2Q9NR77 195 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 PCDHA1Q9Y5I3 950 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 DOCK5Q9H7D0 1870 aa14.88□□□□□ -0.03
RNF4-206ENST00000504782 DLL1O00548 723 aa14.87□□□□□ -0.03
RNF4-206ENST00000504782 SORBS3O60504 671 aa14.87□□□□□ -0.03
RNF4-206ENST00000504782 RGS20O76081 388 aa14.87□□□□□ -0.03
RNF4-206ENST00000504782 NR3C2P08235 984 aa14.87□□□□□ -0.03
RNF4-206ENST00000504782 CHMP4BP1P59074 171 aa14.87□□□□□ -0.03
RNF4-206ENST00000504782 STXBP2Q15833 593 aa14.87□□□□□ -0.03
RNF4-206ENST00000504782 FAM47CQ5HY64 1035 aa14.87□□□□□ -0.03
RNF4-206ENST00000504782 TMEM67Q5HYA8 995 aa14.87□□□□□ -0.03
RNF4-206ENST00000504782 OTOP2Q7RTS6 562 aa14.87□□□□□ -0.03
RNF4-206ENST00000504782 RALYLQ86SE5 291 aaKnown RBP14.87□□□□□ -0.03
RNF4-206ENST00000504782 IL31RAQ8NI17 732 aa14.87□□□□□ -0.03
RNF4-206ENST00000504782 LSG1Q9H089 658 aaKnown RBP14.87□□□□□ -0.03
RNF4-206ENST00000504782 DDX41Q9UJV9 622 aaKnown RBP14.87□□□□□ -0.03
RNF4-206ENST00000504782 TANC1Q9C0D5 1861 aa14.86□□□□□ -0.03
RNF4-206ENST00000504782 FGBP02675 491 aa14.86□□□□□ -0.03
RNF4-206ENST00000504782 MMP3P08254 477 aa14.86□□□□□ -0.03
RNF4-206ENST00000504782 MYCLP12524 364 aaPredicted RBP14.86□□□□□ -0.03
RNF4-206ENST00000504782 GHRHRQ02643 423 aa14.86□□□□□ -0.03
RNF4-206ENST00000504782 PSRC1Q6PGN9 363 aaPredicted RBP14.86□□□□□ -0.03
RNF4-206ENST00000504782 HERVK_113Q902F9 699 aa14.86□□□□□ -0.03
RNF4-206ENST00000504782 KAT2BQ92831 832 aa14.86□□□□□ -0.03
RNF4-206ENST00000504782 GPKOWQ92917 476 aaPredicted RBP eCLIP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms