RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 WTIPA6NIX2 430 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 ARVCFO00192 962 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 MYO1BO43795 1136 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 PPP1R11O60927 126 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 TRHRP34981 398 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 RPL11P62913 178 aaKnown RBP7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 GUCY1A3Q02108 690 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 KIR3DS1Q14943 382 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 KIZQ2M2Z5 673 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 MTDHQ86UE4 582 aaKnown RBP7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 SPPL2CQ8IUH8 684 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 FLAD1Q8NFF5 587 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 NLGN2Q8NFZ4 835 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 ASIC4Q96FT7 647 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 C19orf44Q9H6X5 657 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 ZFP64Q9NPA5 681 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 PRKAB1Q9Y478 270 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 PCDHA9Q9Y5H5 950 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 PCDHA8Q9Y5H6 950 aa7.98□□□□□ -1.13
TRAPPC13-206ENST00000504751 A0A087X0B3 334 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 FAM83GA6ND36 823 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 MSL3P1P0C860 447 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 BCL6P41182 706 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 MASP1P48740 699 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 MVKQ03426 396 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 ZNF460Q14592 562 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 SLC14A2Q15849 920 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 GALNT18Q6P9A2 607 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 NLRX1Q86UT6 975 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 SHISA4Q96DD7 197 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 MAGEB10Q96LZ2 347 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 MTA3Q9BTC8 594 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 PPARGC1AQ9UBK2 798 aaKnown RBP7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 ACSL6Q9UKU0 697 aa7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 TNPO3Q9Y5L0 923 aaKnown RBP7.97□□□□□ -1.13
TRAPPC13-206ENST00000504751 PSPNO60542 156 aa7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 VIL1P09327 827 aaKnown RBP7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 NAT1P18440 290 aa7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 GTF2A2P52657 109 aa7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 RBM10P98175 930 aaKnown RBP7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 LSAMPQ13449 338 aa7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 CBLL1Q75N03 491 aa7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 LRRTM3Q86VH5 581 aa7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 PCDH19Q8TAB3 1148 aa7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 ALG1Q9BT22 464 aa7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 TMX1Q9H3N1 280 aa7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 RWDD3Q9Y3V2 267 aa7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 OAS3Q9Y6K5 1087 aaKnown RBP7.96□□□□□ -1.14
TRAPPC13-206ENST00000504751 GSG1L2A8MUP6 293 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 WNT9AO14904 365 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 ASLP04424 464 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 RAC2P15153 192 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 PRKCAP17252 672 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 FPR2P25090 351 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 GRK2P25098 689 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 GRK3P35626 688 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 IGFALSP35858 605 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 PAK1Q13153 545 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 RNF187Q5TA31 235 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 ABHD17CQ6PCB6 329 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 THNSL2Q86YJ6 484 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 TEX2Q8IWB9 1127 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 LILRA2Q8N149 483 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 NUP43Q8NFH3 380 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 PLEKHO2Q8TD55 490 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 MYLIPQ8WY64 445 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 TARS2Q9BW92 718 aaKnown RBP7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 PDLIM7Q9NR12 457 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 BTG4Q9NY30 223 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 MARCH2Q9P0N8 246 aa7.95□□□□□ -1.14
TRAPPC13-206ENST00000504751 H7BY64 318 aa7.94□□□□□ -1.14
TRAPPC13-206ENST00000504751 SOD2P04179 222 aa7.94□□□□□ -1.14
TRAPPC13-206ENST00000504751 MYCLP1P12525 358 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC13-206ENST00000504751 KCNA6P17658 529 aa7.94□□□□□ -1.14
TRAPPC13-206ENST00000504751 FILIP1Q7Z7B0 1213 aa7.94□□□□□ -1.14
TRAPPC13-206ENST00000504751 LZTR1Q8N653 840 aa7.94□□□□□ -1.14
TRAPPC13-206ENST00000504751 TMEM169Q96HH4 297 aa7.94□□□□□ -1.14
TRAPPC13-206ENST00000504751 SPC25Q9HBM1 224 aa7.94□□□□□ -1.14
TRAPPC13-206ENST00000504751 CLDND1Q9NY35 253 aa7.94□□□□□ -1.14
TRAPPC13-206ENST00000504751 GPR160Q9UJ42 338 aa7.94□□□□□ -1.14
TRAPPC13-206ENST00000504751 C22orf46C9J442 243 aa7.93□□□□□ -1.14
TRAPPC13-206ENST00000504751 OPA1O60313 960 aa7.93□□□□□ -1.14
TRAPPC13-206ENST00000504751 PDE8AO60658 829 aa7.93□□□□□ -1.14
TRAPPC13-206ENST00000504751 DNAJC6O75061 913 aa7.93□□□□□ -1.14
TRAPPC13-206ENST00000504751 POU3F2P20265 443 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC13-206ENST00000504751 TACR1P25103 407 aa7.93□□□□□ -1.14
TRAPPC13-206ENST00000504751 RNF32Q9H0A6 362 aa7.93□□□□□ -1.14
TRAPPC13-206ENST00000504751 IPPKQ9H8X2 491 aa7.93□□□□□ -1.14
TRAPPC13-206ENST00000504751 IFT57Q9NWB7 429 aa7.93□□□□□ -1.14
TRAPPC13-206ENST00000504751 X6R8D5 127 aa7.93□□□□□ -1.14
TRAPPC13-206ENST00000504751 FUCA1P04066 466 aa7.92□□□□□ -1.14
TRAPPC13-206ENST00000504751 CKMP06732 381 aa7.92□□□□□ -1.14
TRAPPC13-206ENST00000504751 STAT3P40763 770 aa7.92□□□□□ -1.14
TRAPPC13-206ENST00000504751 GALK1P51570 392 aa7.92□□□□□ -1.14
TRAPPC13-206ENST00000504751 SNX17Q15036 470 aa7.92□□□□□ -1.14
TRAPPC13-206ENST00000504751 FYB2Q5VWT5 728 aa7.92□□□□□ -1.14
TRAPPC13-206ENST00000504751 ZCCHC8Q6NZY4 707 aaKnown RBP7.92□□□□□ -1.14
TRAPPC13-206ENST00000504751 CEP68Q76N32 757 aa7.92□□□□□ -1.14
TRAPPC13-206ENST00000504751 RNF180Q86T96 592 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms