RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 TMEM39AQ9NV64 488 aa29.43■■■□□ 2.3
PVT1-201ENST00000504719 PCDHA1Q9Y5I3 950 aa29.43■■■□□ 2.3
PVT1-201ENST00000504719 SH2B2O14492 632 aaPredicted RBP29.42■■■□□ 2.3
PVT1-201ENST00000504719 CFBP00751 764 aa29.42■■■□□ 2.3
PVT1-201ENST00000504719 ZNF654Q8IZM8 581 aa29.42■■■□□ 2.3
PVT1-201ENST00000504719 SCFD2Q8WU76 684 aa29.42■■■□□ 2.3
PVT1-201ENST00000504719 RMDN3Q96TC7 470 aa29.42■■■□□ 2.3
PVT1-201ENST00000504719 LAMA3Q16787 3333 aa29.42■■■□□ 2.3
PVT1-201ENST00000504719 NKRFO15226 690 aaKnown RBP eCLIP29.41■■■□□ 2.38e-7■■□□□ 12.5
PVT1-201ENST00000504719 DDAH1O94760 285 aa29.41■■■□□ 2.3
PVT1-201ENST00000504719 HSD17B4P51659 736 aa29.41■■■□□ 2.3
PVT1-201ENST00000504719 PPP2R5BQ15173 497 aa29.41■■■□□ 2.3
PVT1-201ENST00000504719 TMTC2Q8N394 836 aa29.41■■■□□ 2.3
PVT1-201ENST00000504719 SLC43A3Q8NBI5 491 aa29.41■■■□□ 2.3
PVT1-201ENST00000504719 IWS1Q96ST2 819 aa29.41■■■□□ 2.3
PVT1-201ENST00000504719 MAP3K20Q9NYL2 800 aaKnown RBP29.41■■■□□ 2.3
PVT1-201ENST00000504719 PNMA6FA0A0J9YX94 578 aa29.4■■■□□ 2.3
PVT1-201ENST00000504719 RAG1P15918 1043 aa29.4■■■□□ 2.3
PVT1-201ENST00000504719 TRAF1Q13077 416 aa29.4■■■□□ 2.3
PVT1-201ENST00000504719 RNF20Q5VTR2 975 aa29.4■■■□□ 2.3
PVT1-201ENST00000504719 SAMD3Q8N6K7 520 aa29.4■■■□□ 2.3
PVT1-201ENST00000504719 OR6J1Q8NGC5 347 aa29.4■■■□□ 2.3
PVT1-201ENST00000504719 MYL10Q9BUA6 226 aa29.4■■■□□ 2.3
PVT1-201ENST00000504719 LIFRP42702 1097 aa29.39■■■□□ 2.3
PVT1-201ENST00000504719 ARHGEF16Q5VV41 709 aa29.39■■■□□ 2.3
PVT1-201ENST00000504719 FAM126BQ8IXS8 530 aa29.39■■■□□ 2.3
PVT1-201ENST00000504719 TBX21Q9UL17 535 aa29.39■■■□□ 2.3
PVT1-201ENST00000504719 ITGA7Q13683 1181 aa29.38■■■□□ 2.29
PVT1-201ENST00000504719 TTLL4Q14679 1199 aa29.38■■■□□ 2.29
PVT1-201ENST00000504719 STXBP2Q15833 593 aa29.38■■■□□ 2.29
PVT1-201ENST00000504719 NFXL1Q6ZNB6 911 aa29.38■■■□□ 2.29
PVT1-201ENST00000504719 CTCFLQ8NI51 663 aaPredicted RBP29.38■■■□□ 2.29
PVT1-201ENST00000504719 COPS5Q92905 334 aa29.38■■■□□ 2.29
PVT1-201ENST00000504719 PXMP2Q9NR77 195 aa29.38■■■□□ 2.29
PVT1-201ENST00000504719 GRIN2DO15399 1336 aa29.38■■■□□ 2.29
PVT1-201ENST00000504719 CCDC69A6NI79 296 aa29.37■■■□□ 2.29
PVT1-201ENST00000504719 TLR3O15455 904 aaKnown RBP29.37■■■□□ 2.29
PVT1-201ENST00000504719 ARIH2O95376 493 aa29.37■■■□□ 2.29
PVT1-201ENST00000504719 TXNP10599 105 aaKnown RBP29.37■■■□□ 2.29
PVT1-201ENST00000504719 EIF2AK2P19525 551 aaKnown RBP29.37■■■□□ 2.29
PVT1-201ENST00000504719 KIF5BP33176 963 aa29.37■■■□□ 2.29
PVT1-201ENST00000504719 CPT1AP50416 773 aa29.37■■■□□ 2.29
PVT1-201ENST00000504719 SPZ1Q9BXG8 430 aa29.37■■■□□ 2.29
PVT1-201ENST00000504719 SEZ6LQ9BYH1 1024 aa29.37■■■□□ 2.29
PVT1-201ENST00000504719 POLR3EQ9NVU0 708 aa29.37■■■□□ 2.29
PVT1-201ENST00000504719 REC8O95072 547 aa29.36■■■□□ 2.29
PVT1-201ENST00000504719 TIMP1P01033 207 aa29.36■■■□□ 2.29
PVT1-201ENST00000504719 CD4P01730 458 aa29.36■■■□□ 2.29
PVT1-201ENST00000504719 SMARCA1P28370 1054 aa29.36■■■□□ 2.29
PVT1-201ENST00000504719 SHHQ15465 462 aa29.36■■■□□ 2.29
PVT1-201ENST00000504719 GPR153Q6NV75 609 aa29.36■■■□□ 2.29
PVT1-201ENST00000504719 CCDC62Q6P9F0 684 aa29.36■■■□□ 2.29
PVT1-201ENST00000504719 LRRC2Q9BYS8 371 aa29.36■■■□□ 2.29
PVT1-201ENST00000504719 NR3C2P08235 984 aa29.35■■■□□ 2.29
PVT1-201ENST00000504719 PURAQ00577 322 aaKnown RBP29.35■■■□□ 2.29
PVT1-201ENST00000504719 TSGA10IPQ3SY00 556 aa29.35■■■□□ 2.29
PVT1-201ENST00000504719 C9orf50Q5SZB4 431 aa29.35■■■□□ 2.29
PVT1-201ENST00000504719 SEPT14Q6ZU15 432 aa29.35■■■□□ 2.29
PVT1-201ENST00000504719 LZTS2Q9BRK4 669 aa29.35■■■□□ 2.29
PVT1-201ENST00000504719 SCN10AQ9Y5Y9 1956 aa29.34■■■□□ 2.29
PVT1-201ENST00000504719 HOXA13P31271 388 aaPredicted RBP29.34■■■□□ 2.29
PVT1-201ENST00000504719 GNAQP50148 359 aa29.34■■■□□ 2.29
PVT1-201ENST00000504719 PSMC6P62333 389 aa29.34■■■□□ 2.29
PVT1-201ENST00000504719 RASEFQ8IZ41 740 aa29.34■■■□□ 2.29
PVT1-201ENST00000504719 PIBF1Q8WXW3 757 aa29.34■■■□□ 2.29
PVT1-201ENST00000504719 NEK1Q96PY6 1258 aa29.34■■■□□ 2.29
PVT1-201ENST00000504719 A6NJR5 290 aa29.33■■■□□ 2.29
PVT1-201ENST00000504719 GCOM1H8Y6P7 765 aaPredicted RBP29.33■■■□□ 2.29
PVT1-201ENST00000504719 EIF3JO75822 258 aaKnown RBP29.33■■■□□ 2.29
PVT1-201ENST00000504719 MYL3P08590 195 aa29.33■■■□□ 2.29
PVT1-201ENST00000504719 POLR2MP0CAP2 368 aa29.33■■■□□ 2.29
PVT1-201ENST00000504719 CALM1P0DP23 149 aa29.33■■■□□ 2.29
PVT1-201ENST00000504719 CALM2P0DP24 149 aa29.33■■■□□ 2.29
PVT1-201ENST00000504719 CALM3P0DP25 149 aa29.33■■■□□ 2.29
PVT1-201ENST00000504719 FPGSQ05932 587 aa29.33■■■□□ 2.29
PVT1-201ENST00000504719 BRDTQ58F21 947 aaPredicted RBP29.33■■■□□ 2.29
PVT1-201ENST00000504719 SGMS1Q86VZ5 419 aa29.33■■■□□ 2.29
PVT1-201ENST00000504719 PDCD2LQ9BRP1 358 aa29.33■■■□□ 2.29
PVT1-201ENST00000504719 MYH7BA7E2Y1 1941 aa29.33■■■□□ 2.29
PVT1-201ENST00000504719 PLEKHA8P1O95397 391 aa29.32■■■□□ 2.28
PVT1-201ENST00000504719 RXRAP19793 462 aa29.32■■■□□ 2.28
PVT1-201ENST00000504719 EPHB4P54760 987 aa29.32■■■□□ 2.28
PVT1-201ENST00000504719 LY6KQ17RY6 165 aa29.32■■■□□ 2.28
PVT1-201ENST00000504719 SRBD1Q8N5C6 995 aaKnown RBP29.32■■■□□ 2.28
PVT1-201ENST00000504719 RRP36Q96EU6 259 aaKnown RBP29.32■■■□□ 2.28
PVT1-201ENST00000504719 MTG1Q9BT17 334 aaPredicted RBP29.32■■■□□ 2.28
PVT1-201ENST00000504719 SLC12A7Q9Y666 1083 aa29.32■■■□□ 2.28
PVT1-201ENST00000504719 EXOSC10Q01780 885 aaKnown RBP29.31■■■□□ 2.28
PVT1-201ENST00000504719 MFSD5Q6N075 450 aa29.31■■■□□ 2.28
PVT1-201ENST00000504719 KPNA6O60684 536 aa29.3■■■□□ 2.28
PVT1-201ENST00000504719 HSPA4P34932 840 aa29.3■■■□□ 2.28
PVT1-201ENST00000504719 PGM5Q15124 567 aa29.3■■■□□ 2.28
PVT1-201ENST00000504719 ADCK5Q3MIX3 580 aa29.3■■■□□ 2.28
PVT1-201ENST00000504719 DDX41Q9UJV9 622 aaKnown RBP29.3■■■□□ 2.28
PVT1-201ENST00000504719 GH1P01241 217 aa29.29■■■□□ 2.28
PVT1-201ENST00000504719 MYCLP12524 364 aaPredicted RBP29.29■■■□□ 2.28
PVT1-201ENST00000504719 ARHGAP1Q07960 439 aa29.29■■■□□ 2.28
PVT1-201ENST00000504719 KRT32Q14532 448 aa29.29■■■□□ 2.28
PVT1-201ENST00000504719 DHX32Q7L7V1 743 aaKnown RBP29.29■■■□□ 2.28
PVT1-201ENST00000504719 VSIG10LQ86VR7 867 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms