RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PTPN18Q99952 460 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 CSRNP2Q9H175 543 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 RNF146Q9NTX7 359 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 PLXNB2O15031 1838 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 ASTN1O14525 1302 aa11.83□□□□□ -0.52
TPM3-217ENST00000504663 ZNF236Q9UL36 1845 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 A0A1B0GVL5 298 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 FAM155AB1AL88 458 aaPredicted RBP11.82□□□□□ -0.52
TPM3-217ENST00000504663 BTBD19C9JJ37 291 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 FAM86B1E9PN63 330 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 GCOM1H8Y6P7 765 aaPredicted RBP11.82□□□□□ -0.52
TPM3-217ENST00000504663 STK25O00506 426 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 CFBP00751 764 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 FOSP01100 380 aaPredicted RBP11.82□□□□□ -0.52
TPM3-217ENST00000504663 FAM86B2P0C5J1 330 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 POLR2MP0CAP2 368 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 ALAS1P13196 640 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 PRPHP41219 470 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 ARHGAP4P98171 946 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 FAM160A1Q05DH4 1040 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 ZSCAN23Q3MJ62 389 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 ARL6IP4Q66PJ3 421 aaKnown RBP11.82□□□□□ -0.52
TPM3-217ENST00000504663 MOXD1Q6UVY6 613 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 FASTKD5Q7L8L6 764 aaKnown RBP11.82□□□□□ -0.52
TPM3-217ENST00000504663 SAPCD2Q86UD0 394 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 IL31RAQ8NI17 732 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 LRRC15Q8TF66 581 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 TRERF1Q96PN7 1200 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 PURBQ96QR8 312 aaKnown RBP11.82□□□□□ -0.52
TPM3-217ENST00000504663 FUCA2Q9BTY2 467 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 TEX13BQ9BXU2 312 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 CLSTN2Q9H4D0 955 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 KCNMB3Q9NPA1 279 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 RYDENQ9NUL5 291 aaKnown RBP11.82□□□□□ -0.52
TPM3-217ENST00000504663 HOXC10Q9NYD6 342 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 DACT1Q9NYF0 836 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 RBPJLQ9UBG7 517 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 CEP131Q9UPN4 1083 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 SLC45A1Q9Y2W3 748 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 TLL2Q9Y6L7 1015 aa11.82□□□□□ -0.52
TPM3-217ENST00000504663 CCL15-CCL14A0A0B4J2E2 113 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 CCNT1O60563 726 aaKnown RBP11.81□□□□□ -0.52
TPM3-217ENST00000504663 OR52Z1P0C646 297 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 USP11P51784 963 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 HUNKP57058 714 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 CCL15Q16663 113 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 TKFCQ3LXA3 575 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 Q4G0T1 1027 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 SPECC1Q5M775 1068 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 MCTP2Q6DN12 878 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 ANKRD23Q86SG2 305 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 RIOX2Q8IUF8 465 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 FAM43AQ8N2R8 423 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 SAMD3Q8N6K7 520 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 JMYQ8N9B5 988 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 ETNPPLQ8TBG4 499 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 FERMT2Q96AC1 680 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 GPBP1L1Q9HC44 474 aaPredicted RBP11.81□□□□□ -0.52
TPM3-217ENST00000504663 DDX19AQ9NUU7 478 aaKnown RBP11.81□□□□□ -0.52
TPM3-217ENST00000504663 PNMA2Q9UL42 364 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 THSD7BQ9C0I4 1608 aa11.81□□□□□ -0.52
TPM3-217ENST00000504663 LAD1O00515 517 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 NEMFO60524 1076 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 SLC10A3P09131 477 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 CETPP11597 493 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 GCFC2P16383 781 aaKnown RBP11.8□□□□□ -0.52
TPM3-217ENST00000504663 STAT3P40763 770 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 GTF2A2P52657 109 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 ZNF445P59923 1031 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 RPS6P62753 249 aaKnown RBP11.8□□□□□ -0.52
TPM3-217ENST00000504663 SPIRE1Q08AE8 756 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
TPM3-217ENST00000504663 E2F4Q16254 413 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 Q3C1V9 767 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 CCDC183Q5T5S1 534 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 FCHSD1Q86WN1 690 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 IGSF22Q8N9C0 903 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 CYP2W1Q8TAV3 490 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
TPM3-217ENST00000504663 EPSTI1Q96J88 318 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 FGD4Q96M96 766 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 TAAR1Q96RJ0 339 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 MMTAG2Q9BU76 263 aaKnown RBP11.8□□□□□ -0.52
TPM3-217ENST00000504663 MOV10L1Q9BXT6 1211 aaKnown RBP11.8□□□□□ -0.52
TPM3-217ENST00000504663 SPATC1LQ9H0A9 340 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 GZF1Q9H116 711 aaPredicted RBP11.8□□□□□ -0.52
TPM3-217ENST00000504663 A1CFQ9NQ94 594 aaKnown RBP11.8□□□□□ -0.52
TPM3-217ENST00000504663 HOMER2Q9NSB8 354 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 MAP3K20Q9NYL2 800 aaKnown RBP11.8□□□□□ -0.52
TPM3-217ENST00000504663 KIAA1217Q5T5P2 1943 aa11.8□□□□□ -0.52
TPM3-217ENST00000504663 ZNFX1Q9P2E3 1918 aaKnown RBP11.8□□□□□ -0.52
TPM3-217ENST00000504663 PLXNA1Q9UIW2 1896 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 VWA3AA6NCI4 1184 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 SPDYE3A6NKU9 549 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 PP2D1A8MPX8 630 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 IGF2BP3O00425 579 aaKnown RBP eCLIP11.79□□□□□ -0.52
TPM3-217ENST00000504663 ACTN4O43707 911 aaKnown RBP11.79□□□□□ -0.52
TPM3-217ENST00000504663 CYP2C8P10632 490 aa11.79□□□□□ -0.52
TPM3-217ENST00000504663 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.525e-6■□□□□ 10.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms