RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 FGBP02675 491 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 CDK7P50613 346 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 MRPS5P82675 430 aaKnown RBP10.78□□□□□ -0.68
DHFR-202ENST00000504396 GUCA2AQ02747 115 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 TNFAIP2Q03169 654 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 SKIV2LQ15477 1246 aaKnown RBP10.78□□□□□ -0.68
DHFR-202ENST00000504396 SBK1Q52WX2 424 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 AKNAD1Q5T1N1 836 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 CXCL17Q6UXB2 119 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 OTOP2Q7RTS6 562 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 TLK2Q86UE8 772 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 FAM160A2Q8N612 972 aaPredicted RBP10.78□□□□□ -0.68
DHFR-202ENST00000504396 CHST13Q8NET6 341 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 ASB2Q96Q27 587 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 UHRF1Q96T88 793 aaPredicted RBP10.78□□□□□ -0.68
DHFR-202ENST00000504396 AP5M1Q9H0R1 490 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 UPF3AQ9H1J1 476 aaKnown RBP10.78□□□□□ -0.68
DHFR-202ENST00000504396 ACAD9Q9H845 621 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 SLC38A10Q9HBR0 1119 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 ZNF287Q9HBT7 754 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 IL23AQ9NPF7 189 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 RAPGEFL1Q9UHV5 662 aa10.78□□□□□ -0.68
DHFR-202ENST00000504396 V9GY48 417 aaPredicted RBP10.78□□□□□ -0.68
DHFR-202ENST00000504396 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.77□□□□□ -0.68
DHFR-202ENST00000504396 ZEB2O60315 1214 aa10.77□□□□□ -0.68
DHFR-202ENST00000504396 FDX1P10109 184 aa10.77□□□□□ -0.68
DHFR-202ENST00000504396 CCL23P55773 120 aa10.77□□□□□ -0.68
DHFR-202ENST00000504396 CNTN2Q02246 1040 aa10.77□□□□□ -0.68
DHFR-202ENST00000504396 PPP2R2DQ66LE6 453 aa10.77□□□□□ -0.68
DHFR-202ENST00000504396 SLFN13Q68D06 897 aa10.77□□□□□ -0.68
DHFR-202ENST00000504396 CEP95Q96GE4 821 aa10.77□□□□□ -0.68
DHFR-202ENST00000504396 STRBPQ96SI9 672 aaKnown RBP10.77□□□□□ -0.68
DHFR-202ENST00000504396 LRRCC1Q9C099 1032 aa10.77□□□□□ -0.68
DHFR-202ENST00000504396 PRDM9Q9NQV7 894 aa10.77□□□□□ -0.68
DHFR-202ENST00000504396 ZBTB40Q9NUA8 1239 aa10.77□□□□□ -0.68
DHFR-202ENST00000504396 CXXC1Q9P0U4 656 aaPredicted RBP10.77□□□□□ -0.68
DHFR-202ENST00000504396 TMEM232C9JQI7 657 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 SMARCA5O60264 1052 aaPredicted RBP10.76□□□□□ -0.69
DHFR-202ENST00000504396 TTLL1O95922 423 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 TSPY3P0CV98 308 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 TSPY8P0CW00 308 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 BMP3P12645 472 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 ALAS1P13196 640 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 STAT2P52630 851 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 RABGGTBP53611 331 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 OAZ1P54368 228 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 ITGA7Q13683 1181 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 ADGRE1Q14246 886 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 FSCN1Q16658 493 aaKnown RBP10.76□□□□□ -0.69
DHFR-202ENST00000504396 RASIP1Q5U651 963 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 DIEXFQ68CQ4 756 aaKnown RBP10.76□□□□□ -0.69
DHFR-202ENST00000504396 EEPD1Q7L9B9 569 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 SIRT2Q8IXJ6 389 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 HERVK_113Q902F9 699 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 EMID1Q96A84 441 aaPredicted RBP10.76□□□□□ -0.69
DHFR-202ENST00000504396 GPATCH3Q96I76 525 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 FGD4Q96M96 766 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 SEZ6LQ9BYH1 1024 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 RNF146Q9NTX7 359 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 MTMR7Q9Y216 660 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 YBX2Q9Y2T7 364 aaKnown RBP10.76□□□□□ -0.69
DHFR-202ENST00000504396 GTF3C3Q9Y5Q9 886 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 UMODL1Q5DID0 1318 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 LRRC37A2A6NM11 1700 aa10.76□□□□□ -0.69
DHFR-202ENST00000504396 ASB14A6NK59 587 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 GSG1L2A8MUP6 293 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 DYNC1LI2O43237 492 aaPredicted RBP10.75□□□□□ -0.69
DHFR-202ENST00000504396 GPAA1O43292 621 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 CABYRO75952 493 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 GNAT2P19087 354 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 PTGS1P23219 599 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 PSMC6P62333 389 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 NKX3-2P78367 333 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 PDE4DQ08499 809 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 FBXO16Q8IX29 292 aaPredicted RBP10.75□□□□□ -0.69
DHFR-202ENST00000504396 APPBP2Q92624 585 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 ECHDC1Q9NTX5 307 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 MTMR4Q9NYA4 1195 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 SLC4A7Q9Y6M7 1214 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 CD4P01730 458 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 SLC3A2P08195 630 aaKnown RBP10.75□□□□□ -0.69
DHFR-202ENST00000504396 MYOGP15173 224 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 SLC1A4P43007 532 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 PDE4BQ07343 736 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 PLA2G2CQ5R387 149 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 TSHZ3Q63HK5 1081 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 NSMFQ6X4W1 530 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 RPUSD2Q8IZ73 545 aaKnown RBP10.75□□□□□ -0.69
DHFR-202ENST00000504396 GMCL1P1Q8NEA9 526 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 SPIRE2Q8WWL2 714 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 OSBP2Q969R2 916 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 MKL1Q969V6 931 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 SCLYQ96I15 445 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 AGBL1Q96MI9 1066 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 NECAB3Q96P71 396 aaPredicted RBP10.75□□□□□ -0.69
DHFR-202ENST00000504396 TRERF1Q96PN7 1200 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 NACAP1Q9BZK3 213 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 TRPV6Q9H1D0 765 aa10.75□□□□□ -0.69
DHFR-202ENST00000504396 A1CFQ9NQ94 594 aaKnown RBP10.75□□□□□ -0.69
DHFR-202ENST00000504396 DDX49Q9Y6V7 483 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms