RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 MAMDC4Q6UXC1 1216 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 BTNL9Q6UXG8 535 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 SH3RF1Q7Z6J0 888 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 TBC1D10CQ8IV04 446 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 GPKOWQ92917 476 aaPredicted RBP eCLIP10.46□□□□□ -0.73
SSBP2-202ENST00000504136 RILPL2Q969X0 211 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 TTC14Q96N46 770 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 MMP19Q99542 508 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 INCENPQ9NQS7 918 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 RIPK3Q9Y572 518 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 NR2E3Q9Y5X4 410 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 ZNF536O15090 1300 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 RAD50Q92878 1312 aa10.46□□□□□ -0.73
SSBP2-202ENST00000504136 LCTP09848 1927 aa10.46□□□□□ -0.74
SSBP2-202ENST00000504136 SYNGAP1Q96PV0 1343 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 NMT2O60551 498 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 ZBED4O75132 1171 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 SLC1A4P43007 532 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 KCTD2Q14681 263 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 TTC22Q5TAA0 569 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 SNRNP48Q6IEG0 339 aaKnown RBP10.45□□□□□ -0.74
SSBP2-202ENST00000504136 EHBP1Q8NDI1 1231 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 CHST13Q8NET6 341 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 CHURC1Q8WUH1 139 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 DCAF4Q8WV16 495 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 FGD4Q96M96 766 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 TINF2Q9BSI4 451 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 RNF41Q9H4P4 317 aaPredicted RBP10.45□□□□□ -0.74
SSBP2-202ENST00000504136 C11orf49Q9H6J7 331 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 FBXO40Q9UH90 709 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 SMCHD1A6NHR9 2005 aa10.45□□□□□ -0.74
SSBP2-202ENST00000504136 A0A1W2PPC1 479 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 TMEM232C9JQI7 657 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 DNM1LO00429 736 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 RANBP6O60518 1105 aaKnown RBP10.44□□□□□ -0.74
SSBP2-202ENST00000504136 GPR37L1O60883 481 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 TOP1P11387 765 aaKnown RBP10.44□□□□□ -0.74
SSBP2-202ENST00000504136 TKFCQ3LXA3 575 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 ANKS1AQ92625 1134 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 DPF3Q92784 378 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 KIFC2Q96AC6 838 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 TMEM47Q9BQJ4 181 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 IL25Q9H293 177 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 DIAPH3Q9NSV4 1193 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 STX8Q9UNK0 236 aa10.44□□□□□ -0.74
SSBP2-202ENST00000504136 MCM3APO60318 1980 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 NEDD4P46934 1319 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 RAD21O60216 631 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 ZNF865P0CJ78 1059 aaPredicted RBP10.43□□□□□ -0.74
SSBP2-202ENST00000504136 MCCP23508 829 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 VARSP26640 1264 aaKnown RBP10.43□□□□□ -0.74
SSBP2-202ENST00000504136 BMP8BP34820 402 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 NKX3-2P78367 333 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 SNX17Q15036 470 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 PDXDC2PQ6P474 469 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 CWC27Q6UX04 472 aaKnown RBP10.43□□□□□ -0.74
SSBP2-202ENST00000504136 MFSD6Q6ZSS7 791 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 DGKHQ86XP1 1220 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 CYP4X1Q8N118 509 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 FAM133AQ8N9E0 248 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 SNIP1Q8TAD8 396 aaKnown RBP10.43□□□□□ -0.74
SSBP2-202ENST00000504136 GDF15Q99988 308 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 RANBP17Q9H2T7 1088 aaKnown RBP10.43□□□□□ -0.74
SSBP2-202ENST00000504136 RAVER2Q9HCJ3 691 aaKnown RBP10.43□□□□□ -0.74
SSBP2-202ENST00000504136 PRR12Q9ULL5 1215 aa10.43□□□□□ -0.74
SSBP2-202ENST00000504136 LTBP2Q14767 1821 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 ZNF213O14771 459 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 PGK2P07205 417 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 PDHBP11177 359 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 FXR1P51114 621 aaKnown RBP eCLIP10.42□□□□□ -0.74
SSBP2-202ENST00000504136 HAND2P61296 217 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 CCDC178Q5BJE1 867 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 C1orf53Q5VUE5 145 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 RASGRP2Q7LDG7 609 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 ESR2Q92731 530 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 OCSTAMPQ9BR26 566 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 C1QTNF2Q9BXJ5 285 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 MAF1Q9H063 256 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 KATNBL1Q9H079 304 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 CTNNA3Q9UI47 895 aa10.42□□□□□ -0.74
SSBP2-202ENST00000504136 RANBP2P49792 3224 aaKnown RBP10.42□□□□□ -0.74
SSBP2-202ENST00000504136 TRIOBPQ9H2D6 2365 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 WDR19Q8NEZ3 1342 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 LOC102724159A0A0B4J2E5 919 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 SNAI1O95863 264 aaPredicted RBP10.41□□□□□ -0.74
SSBP2-202ENST00000504136 ICAM1P05362 532 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 AKR1A1P14550 325 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 SMPD1P17405 629 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 CHMLP26374 656 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 ZNF543Q08ER8 600 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 PWP2Q15269 919 aaKnown RBP10.41□□□□□ -0.74
SSBP2-202ENST00000504136 LRRC41Q15345 812 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 LRRC26Q2I0M4 334 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 KCTD1Q719H9 257 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 BPHLQ86WA6 291 aaPredicted RBP10.41□□□□□ -0.74
SSBP2-202ENST00000504136 CPXCR1Q8N123 301 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 ARRDC4Q8NCT1 418 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 MORC4Q8TE76 937 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 ACAD9Q9H845 621 aa10.41□□□□□ -0.74
SSBP2-202ENST00000504136 A1CFQ9NQ94 594 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms