RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 MMP1P03956 469 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 ICAM1P05362 532 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 COPB2P35606 906 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 PKN1Q16512 942 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 QRICH1Q2TAL8 776 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 ANKRD23Q86SG2 305 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 MCF2L2Q86YR7 1114 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 SAMD3Q8N6K7 520 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 SMCR8Q8TEV9 937 aaPredicted RBP10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 GBP4Q96PP9 640 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 MAF1Q9H063 256 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 FOXP1Q9H334 677 aaPredicted RBP10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 EHMT1Q9H9B1 1298 aa10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 ZCCHC17Q9NP64 241 aaKnown RBP10.56□□□□□ -0.72
ARHGEF28-206ENST00000504003 hCG_1642624A0A1W2PR95 340 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 SMCO2A6NFE2 343 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 FAM187AA6NFU0 413 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 VWA5AO00534 786 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 F13A1P00488 732 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 DDIT3P35638 169 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 ADCY7P51828 1080 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 TKFCQ3LXA3 575 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 PUS10Q3MIT2 529 aaKnown RBP10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 KIAA1755Q5JYT7 1200 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 WWC2Q6AWC2 1192 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 ATL3Q6DD88 541 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 CCDC174Q6PII3 467 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 RASGRP2Q7LDG7 609 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 CCAR1Q8IX12 1150 aaKnown RBP10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 ZNF396Q96N95 335 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 PARK7Q99497 189 aaKnown RBP10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 PHF20Q9BVI0 1012 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 ZMYND12Q9H0C1 365 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 CPVLQ9H3G5 476 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 PSTPIP2Q9H939 334 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 SLC38A10Q9HBR0 1119 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 MAP3K20Q9NYL2 800 aaKnown RBP10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 VPS54Q9P1Q0 977 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 CFAP45Q9UL16 551 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 CCPG1Q9ULG6 757 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 NOL7Q9UMY1 257 aaKnown RBP10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 PCDHA4Q9UN74 947 aa10.55□□□□□ -0.72
ARHGEF28-206ENST00000504003 CCDC194A0A1B0GVG4 234 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 STXBP3O00186 592 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 ALDH1A1P00352 501 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 GCLCP48506 637 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 CCNA1P78396 465 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 GUCY1B3Q02153 619 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 NOGQ13253 232 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 DEFB115Q30KQ5 88 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 USH1GQ495M9 461 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 TREML2Q5T2D2 321 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 COL13A1Q5TAT6 717 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 LBX2Q6XYB7 198 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 RASAL3Q86YV0 1011 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 DIS3L2Q8IYB7 885 aaKnown RBP10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 BLIDQ8IZY5 108 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 CPXCR1Q8N123 301 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 REXO1Q8N1G1 1221 aaKnown RBP10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 DAGLBQ8NCG7 672 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 GPKOWQ92917 476 aaPredicted RBP eCLIP10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 TEX13BQ9BXU2 312 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 ASCC2Q9H1I8 757 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 FBXO28Q9NVF7 368 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 FBXO40Q9UH90 709 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 BAZ2BQ9UIF8 2168 aaKnown RBP10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 MTMR6Q9Y217 621 aa10.54□□□□□ -0.72
ARHGEF28-206ENST00000504003 SPDYE3A6NKU9 549 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 TNFRSF10AO00220 468 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 PDHXO00330 501 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 ATP2A1O14983 1001 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 SLC25A27O95847 323 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 FOSP01100 380 aaPredicted RBP10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 PTMSP20962 102 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 HERVK_113P62684 666 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 PLS1Q14651 629 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 KRT25Q7Z3Z0 450 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 NOSTRINQ8IVI9 506 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 COA7Q96BR5 231 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 ATG4CQ96DT6 458 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 AIFM3Q96NN9 605 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 NAP1L4Q99733 375 aaKnown RBP10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 RIC8AQ9NPQ8 531 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 ADAMTS5Q9UNA0 930 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 KCNJ14Q9UNX9 436 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 CEP131Q9UPN4 1083 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 RABGAP1Q9Y3P9 1069 aa10.53□□□□□ -0.72
ARHGEF28-206ENST00000504003 RASSF10A6NK89 507 aa10.52□□□□□ -0.73
ARHGEF28-206ENST00000504003 DDX11L8A8MPP1 907 aa10.52□□□□□ -0.73
ARHGEF28-206ENST00000504003 GCOM1H8Y6P7 765 aaPredicted RBP10.52□□□□□ -0.73
ARHGEF28-206ENST00000504003 GDF9O60383 454 aa10.52□□□□□ -0.73
ARHGEF28-206ENST00000504003 POLR2MP0CAP2 368 aa10.52□□□□□ -0.73
ARHGEF28-206ENST00000504003 ALAS1P13196 640 aa10.52□□□□□ -0.73
ARHGEF28-206ENST00000504003 U2AF2P26368 475 aaKnown RBP eCLIP10.52□□□□□ -0.731e-6■□□□□ 10.6
ARHGEF28-206ENST00000504003 GJA5P36382 358 aa10.52□□□□□ -0.73
ARHGEF28-206ENST00000504003 STAT3P40763 770 aa10.52□□□□□ -0.73
ARHGEF28-206ENST00000504003 TRAPPC10P48553 1259 aa10.52□□□□□ -0.73
ARHGEF28-206ENST00000504003 KRT85P78386 507 aa10.52□□□□□ -0.73
ARHGEF28-206ENST00000504003 KIF23Q02241 960 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms