RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 QRICH1Q2TAL8 776 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 TMEM63BQ5T3F8 832 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 RASIP1Q5U651 963 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 SLC30A10Q6XR72 485 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 ZNF365Q70YC5 407 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 FAM126BQ8IXS8 530 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 TMEM199Q8N511 208 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 SCFD2Q8WU76 684 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 TBC1D5Q92609 795 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 AMNQ9BXJ7 453 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 PPP1R12CQ9BZL4 782 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 PRDM6Q9NQX0 595 aa13.92□□□□□ -0.18
MED28-203ENST00000503945 SPTBN5Q9NRC6 3674 aaKnown RBP13.92□□□□□ -0.18
MED28-203ENST00000503945 PALM3A6NDB9 673 aaPredicted RBP13.91□□□□□ -0.18
MED28-203ENST00000503945 E7EWF7 191 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 KPNA6O60684 536 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 CD4P01730 458 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 TXNP10599 105 aaKnown RBP13.91□□□□□ -0.18
MED28-203ENST00000503945 CYP2C18P33260 490 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 TTLL4Q14679 1199 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 WTAPQ15007 396 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 SYMPKQ92797 1274 aaKnown RBP13.91□□□□□ -0.18
MED28-203ENST00000503945 TAAR1Q96RJ0 339 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 IWS1Q96ST2 819 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 RMDN3Q96TC7 470 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 PBX4Q9BYU1 374 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 POLR3EQ9NVU0 708 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 GBF1Q92538 1859 aa13.91□□□□□ -0.18
MED28-203ENST00000503945 PTGS1P23219 599 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 PPP2R5BQ15173 497 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 STXBP2Q15833 593 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 ARHGEF16Q5VV41 709 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 CHST3Q7LGC8 479 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 CATIPQ7Z7H3 387 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 TMTC2Q8N394 836 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 SLC43A3Q8NBI5 491 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 OR6J1Q8NGC5 347 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 SYTL5Q8TDW5 730 aaPredicted RBP13.9□□□□□ -0.18
MED28-203ENST00000503945 PPM1EQ8WY54 764 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 MAP3K20Q9NYL2 800 aaKnown RBP13.9□□□□□ -0.18
MED28-203ENST00000503945 MAD2L2Q9UI95 211 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 PCDHA1Q9Y5I3 950 aa13.9□□□□□ -0.18
MED28-203ENST00000503945 ZBTB5O15062 677 aa13.89□□□□□ -0.19
MED28-203ENST00000503945 EIF3JO75822 258 aaKnown RBP13.89□□□□□ -0.19
MED28-203ENST00000503945 CFBP00751 764 aa13.89□□□□□ -0.19
MED28-203ENST00000503945 MYL3P08590 195 aa13.89□□□□□ -0.19
MED28-203ENST00000503945 SUPT20HL2P0C7V6 817 aa13.89□□□□□ -0.19
MED28-203ENST00000503945 EDNRBP24530 442 aa13.89□□□□□ -0.19
MED28-203ENST00000503945 TMEM67Q5HYA8 995 aa13.89□□□□□ -0.19
MED28-203ENST00000503945 SEPT14Q6ZU15 432 aa13.89□□□□□ -0.19
MED28-203ENST00000503945 SAMD3Q8N6K7 520 aa13.89□□□□□ -0.19
MED28-203ENST00000503945 PRDM12Q9H4Q4 367 aa13.89□□□□□ -0.19
MED28-203ENST00000503945 CXXC1Q9P0U4 656 aaPredicted RBP13.89□□□□□ -0.19
MED28-203ENST00000503945 GRIN2DO15399 1336 aa13.89□□□□□ -0.19
MED28-203ENST00000503945 PSMC6P62333 389 aa13.88□□□□□ -0.19
MED28-203ENST00000503945 GRM4Q14833 912 aa13.88□□□□□ -0.19
MED28-203ENST00000503945 TJAP1Q5JTD0 557 aa13.88□□□□□ -0.19
MED28-203ENST00000503945 CASC1Q6TDU7 716 aa13.88□□□□□ -0.19
MED28-203ENST00000503945 IGDCC4Q8TDY8 1250 aa13.88□□□□□ -0.19
MED28-203ENST00000503945 HERVK_113Q902F9 699 aa13.88□□□□□ -0.19
MED28-203ENST00000503945 MTMR8Q96EF0 704 aa13.88□□□□□ -0.19
MED28-203ENST00000503945 GAS2L1Q99501 681 aaPredicted RBP13.88□□□□□ -0.19
MED28-203ENST00000503945 MTG1Q9BT17 334 aaPredicted RBP13.88□□□□□ -0.19
MED28-203ENST00000503945 TRPV6Q9H1D0 765 aa13.88□□□□□ -0.19
MED28-203ENST00000503945 RIOX1Q9H6W3 641 aa13.88□□□□□ -0.19
MED28-203ENST00000503945 IL23AQ9NPF7 189 aa13.88□□□□□ -0.19
MED28-203ENST00000503945 RBM8AQ9Y5S9 174 aaKnown RBP13.88□□□□□ -0.19
MED28-203ENST00000503945 UMODL1Q5DID0 1318 aa13.88□□□□□ -0.19
MED28-203ENST00000503945 PNMA6FA0A0J9YX94 578 aa13.87□□□□□ -0.19
MED28-203ENST00000503945 A6NJR5 290 aa13.87□□□□□ -0.19
MED28-203ENST00000503945 FGBP02675 491 aa13.87□□□□□ -0.19
MED28-203ENST00000503945 NR3C2P08235 984 aa13.87□□□□□ -0.19
MED28-203ENST00000503945 PURAQ00577 322 aaKnown RBP13.87□□□□□ -0.19
MED28-203ENST00000503945 TROAPQ12815 778 aa13.87□□□□□ -0.19
MED28-203ENST00000503945 ADGRE1Q14246 886 aa13.87□□□□□ -0.19
MED28-203ENST00000503945 PSRC1Q6PGN9 363 aaPredicted RBP13.87□□□□□ -0.19
MED28-203ENST00000503945 HOMER1Q86YM7 354 aa13.87□□□□□ -0.19
MED28-203ENST00000503945 RPUSD2Q8IZ73 545 aaKnown RBP13.87□□□□□ -0.19
MED28-203ENST00000503945 MTA3Q9BTC8 594 aa13.87□□□□□ -0.19
MED28-203ENST00000503945 HIPK3Q9H422 1215 aa13.87□□□□□ -0.19
MED28-203ENST00000503945 LCTP09848 1927 aa13.87□□□□□ -0.19
MED28-203ENST00000503945 GCOM1H8Y6P7 765 aaPredicted RBP13.86□□□□□ -0.19
MED28-203ENST00000503945 GH1P01241 217 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 POLR2MP0CAP2 368 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 KIF5BP33176 963 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 MCM5P33992 734 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 CCL23P55773 120 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 CCDC85BQ15834 202 aaPredicted RBP13.86□□□□□ -0.19
MED28-203ENST00000503945 LY6KQ17RY6 165 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 CCDC62Q6P9F0 684 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 STOX1Q6ZVD7 989 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 CENPQQ7L2Z9 268 aaPredicted RBP13.86□□□□□ -0.19
MED28-203ENST00000503945 COPS5Q92905 334 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 PIGSQ96S52 555 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 ALDH8A1Q9H2A2 487 aaPredicted RBP13.86□□□□□ -0.19
MED28-203ENST00000503945 NKX2-4Q9H2Z4 354 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 SENP2Q9HC62 589 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 COL20A1Q9P218 1284 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms