RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ATP2A1O14983 1001 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 NEMFO60524 1076 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 ZNF202O95125 648 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 CELF2O95319 508 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 CFBP00751 764 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 FAM86B2P0C5J1 330 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 OR52Z1P0C646 297 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 ALAS1P13196 640 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 CYP3A7P24462 503 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 PRPHP41219 470 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 OAZ1P54368 228 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 FKBP1BP68106 108 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 ARHGAP4P98171 946 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 ORC2Q13416 577 aaPredicted RBP7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 ARL6IP4Q66PJ3 421 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 PPP4R3AQ6IN85 833 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 SLC30A10Q6XR72 485 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 GADL1Q6ZQY3 521 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 CCDC73Q6ZRK6 1079 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 TEX2Q8IWB9 1127 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 LRRC15Q8TF66 581 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 SYMPKQ92797 1274 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 GJA10Q969M2 543 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 SYAP1Q96A49 352 aaPredicted RBP7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 MS4A4AQ96JQ5 239 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 R3HDMLQ9H3Y0 253 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 KCNMB3Q9NPA1 279 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 HOMER2Q9NSB8 354 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 AGTPBP1Q9UPW5 1226 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 MRPL11Q9Y3B7 192 aaKnown RBP7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 PLXNB2O15031 1838 aa7.84□□□□□ -1.15
TOPBP1-203ENST00000503464 PASKQ96RG2 1323 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 IGLV3-22A0A075B6J6 115 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 A0A087WWV3 80 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 GCOM1H8Y6P7 765 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 LAD1O00515 517 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 FOXN1O15353 648 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 ACTN4O43707 911 aaKnown RBP7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 ZBED4O75132 1171 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 CYP3A4P08684 503 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 POLR2MP0CAP2 368 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 FDX1P10109 184 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 CDC25AP30304 524 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 CIITAP33076 1130 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 USP11P51784 963 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 TRAF1Q13077 416 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 E2F4Q16254 413 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 LONRF3Q496Y0 759 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 SNRNP48Q6IEG0 339 aaKnown RBP7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 MOXD1Q6UVY6 613 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 LRSAM1Q6UWE0 723 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 LBX2Q6XYB7 198 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 FCHSD1Q86WN1 690 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 CKAP2LQ8IYA6 745 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 IGSF22Q8N9C0 903 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 IL31RAQ8NI17 732 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 CYP2W1Q8TAV3 490 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 ETNPPLQ8TBG4 499 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 SYTL5Q8TDW5 730 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 ERCC4Q92889 916 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 TRERF1Q96PN7 1200 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 PURBQ96QR8 312 aaKnown RBP7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 MMTAG2Q9BU76 263 aaKnown RBP7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 ASCC2Q9H1I8 757 aaPredicted RBP7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 TXNRD2Q9NNW7 524 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 RNF146Q9NTX7 359 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 DDX25Q9UHL0 483 aaKnown RBP7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 KCNH3Q9ULD8 1083 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 PLXNA1Q9UIW2 1896 aa7.83□□□□□ -1.16
TOPBP1-203ENST00000503464 MCM3APO60318 1980 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 ASTN1O14525 1302 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 SPDYE3A6NKU9 549 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 KIF3CO14782 793 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 KINO60870 393 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 FOSP01100 380 aaPredicted RBP7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 GCFC2P16383 781 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 LONP1P36776 959 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 SYKP43405 635 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 HERVK_113P62684 666 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 RPS6P62753 249 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 UBXN2AP68543 259 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 MDM2Q00987 491 aaPredicted RBP7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 SPIRE1Q08AE8 756 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 MKRN3Q13064 507 aaKnown RBP7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 SNAPC2Q13487 334 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 CALCRLQ16602 461 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 Q4G0T1 1027 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 NAALADL2Q58DX5 795 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 MCTP2Q6DN12 878 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 PDXDC2PQ6P474 469 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 DTHD1Q6ZMT9 781 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 KRBA2Q6ZNG9 492 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 GRAMD1CQ8IYS0 662 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 BRI3BPQ8WY22 251 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 SLC10A4Q96EP9 437 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 ZFP91Q96JP5 570 aaPredicted RBP7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 TIGD1Q96MW7 591 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 UIMC1Q96RL1 719 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 MTRQ99707 1265 aa7.82□□□□□ -1.16
TOPBP1-203ENST00000503464 TEX13BQ9BXU2 312 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms