RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TMEM240Q5SV17 173 aa18.93■□□□□ 0.62
SCLT1-204ENST00000503215 CCDC62Q6P9F0 684 aa18.93■□□□□ 0.62
SCLT1-204ENST00000503215 SEPT14Q6ZU15 432 aa18.93■□□□□ 0.62
SCLT1-204ENST00000503215 SCFD2Q8WU76 684 aa18.93■□□□□ 0.62
SCLT1-204ENST00000503215 TTYH1Q9H313 450 aaPredicted RBP18.93■□□□□ 0.62
SCLT1-204ENST00000503215 MRPL11Q9Y3B7 192 aaKnown RBP18.93■□□□□ 0.62
SCLT1-204ENST00000503215 CYTH3O43739 400 aa18.93■□□□□ 0.62
SCLT1-204ENST00000503215 CFBP00751 764 aa18.93■□□□□ 0.62
SCLT1-204ENST00000503215 SMAD3P84022 425 aaKnown RBP18.93■□□□□ 0.62
SCLT1-204ENST00000503215 MB21D2Q8IYB1 491 aaPredicted RBP18.93■□□□□ 0.62
SCLT1-204ENST00000503215 NCOA7Q8NI08 942 aa18.93■□□□□ 0.62
SCLT1-204ENST00000503215 IGDCC4Q8TDY8 1250 aa18.93■□□□□ 0.62
SCLT1-204ENST00000503215 NSUN6Q8TEA1 469 aaKnown RBP18.93■□□□□ 0.62
SCLT1-204ENST00000503215 RMDN3Q96TC7 470 aa18.93■□□□□ 0.62
SCLT1-204ENST00000503215 SEMA6BQ9H3T3 888 aa18.93■□□□□ 0.62
SCLT1-204ENST00000503215 TRMT13Q9NUP7 481 aaKnown RBP18.93■□□□□ 0.62
SCLT1-204ENST00000503215 EIF2AK2P19525 551 aaKnown RBP18.92■□□□□ 0.62
SCLT1-204ENST00000503215 TROAPQ12815 778 aa18.92■□□□□ 0.62
SCLT1-204ENST00000503215 LY6KQ17RY6 165 aa18.92■□□□□ 0.62
SCLT1-204ENST00000503215 TMEM67Q5HYA8 995 aa18.92■□□□□ 0.62
SCLT1-204ENST00000503215 ZNF697Q5TEC3 545 aa18.92■□□□□ 0.62
SCLT1-204ENST00000503215 ZNF365Q70YC5 407 aa18.92■□□□□ 0.62
SCLT1-204ENST00000503215 RALYLQ86SE5 291 aaKnown RBP18.92■□□□□ 0.62
SCLT1-204ENST00000503215 HOMER1Q86YM7 354 aa18.92■□□□□ 0.62
SCLT1-204ENST00000503215 MCF2L2Q86YR7 1114 aa18.92■□□□□ 0.62
SCLT1-204ENST00000503215 SLC17A8Q8NDX2 589 aa18.92■□□□□ 0.62
SCLT1-204ENST00000503215 PIGSQ96S52 555 aa18.92■□□□□ 0.62
SCLT1-204ENST00000503215 NOC4LQ9BVI4 516 aaKnown RBP18.92■□□□□ 0.62
SCLT1-204ENST00000503215 AMNQ9BXJ7 453 aa18.92■□□□□ 0.62
SCLT1-204ENST00000503215 LSG1Q9H089 658 aaKnown RBP18.92■□□□□ 0.62
SCLT1-204ENST00000503215 ALDH8A1Q9H2A2 487 aaPredicted RBP18.92■□□□□ 0.62
SCLT1-204ENST00000503215 HIPK3Q9H422 1215 aa18.92■□□□□ 0.62
SCLT1-204ENST00000503215 A6NJR5 290 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 GRXCR1A8MXD5 290 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 ZBTB5O15062 677 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 HOXA13P31271 388 aaPredicted RBP18.91■□□□□ 0.62
SCLT1-204ENST00000503215 CPT1AP50416 773 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 HSD17B4P51659 736 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 CCL23P55773 120 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 PPIGQ13427 754 aaKnown RBP eCLIP18.91■□□□□ 0.62
SCLT1-204ENST00000503215 WTAPQ15007 396 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 PIBF1Q8WXW3 757 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 VWCEQ96DN2 955 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 MPHOSPH6Q99547 160 aaKnown RBP18.91■□□□□ 0.62
SCLT1-204ENST00000503215 MTG1Q9BT17 334 aaPredicted RBP18.91■□□□□ 0.62
SCLT1-204ENST00000503215 MYL10Q9BUA6 226 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 WNT8AQ9H1J5 351 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 RIOX1Q9H6W3 641 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 POLR3EQ9NVU0 708 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 PCDHA1Q9Y5I3 950 aa18.91■□□□□ 0.62
SCLT1-204ENST00000503215 MYH6P13533 1939 aa18.9■□□□□ 0.62
SCLT1-204ENST00000503215 RBAK-RBAKDNI3L0D1 243 aa18.9■□□□□ 0.62
SCLT1-204ENST00000503215 NKRFO15226 690 aaKnown RBP eCLIP18.9■□□□□ 0.62
SCLT1-204ENST00000503215 CYP2C9P11712 490 aa18.9■□□□□ 0.62
SCLT1-204ENST00000503215 TTLL4Q14679 1199 aa18.9■□□□□ 0.62
SCLT1-204ENST00000503215 NBPF20Q3BBV1 942 aa18.9■□□□□ 0.62
SCLT1-204ENST00000503215 ARHGEF16Q5VV41 709 aa18.9■□□□□ 0.62
SCLT1-204ENST00000503215 TMEM199Q8N511 208 aa18.9■□□□□ 0.62
SCLT1-204ENST00000503215 AFG1LQ8WV93 481 aa18.9■□□□□ 0.62
SCLT1-204ENST00000503215 ZFP91Q96JP5 570 aaPredicted RBP18.9■□□□□ 0.62
SCLT1-204ENST00000503215 CDX2Q99626 313 aaPredicted RBP18.9■□□□□ 0.62
SCLT1-204ENST00000503215 ESYT1Q9BSJ8 1104 aa18.9■□□□□ 0.62
SCLT1-204ENST00000503215 PXMP2Q9NR77 195 aa18.9■□□□□ 0.62
SCLT1-204ENST00000503215 A0A0C4DFX4 3053 aa18.9■□□□□ 0.62
SCLT1-204ENST00000503215 B4DLN1 442 aa18.89■□□□□ 0.61
SCLT1-204ENST00000503215 NR3C2P08235 984 aa18.89■□□□□ 0.61
SCLT1-204ENST00000503215 MRPL12P52815 198 aaKnown RBP18.89■□□□□ 0.61
SCLT1-204ENST00000503215 ARHGAP1Q07960 439 aa18.89■□□□□ 0.61
SCLT1-204ENST00000503215 STXBP2Q15833 593 aa18.89■□□□□ 0.61
SCLT1-204ENST00000503215 RASIP1Q5U651 963 aa18.89■□□□□ 0.61
SCLT1-204ENST00000503215 IL31RAQ8NI17 732 aa18.89■□□□□ 0.61
SCLT1-204ENST00000503215 IWS1Q96ST2 819 aa18.89■□□□□ 0.61
SCLT1-204ENST00000503215 LY9Q9HBG7 655 aa18.89■□□□□ 0.61
SCLT1-204ENST00000503215 CXXC1Q9P0U4 656 aaPredicted RBP18.89■□□□□ 0.61
SCLT1-204ENST00000503215 ERICH2A1L162 156 aa18.88■□□□□ 0.61
SCLT1-204ENST00000503215 PBX2P40425 430 aa18.88■□□□□ 0.61
SCLT1-204ENST00000503215 CHMP4BP1P59074 171 aa18.88■□□□□ 0.61
SCLT1-204ENST00000503215 GHRHRQ02643 423 aa18.88■□□□□ 0.61
SCLT1-204ENST00000503215 SCLYQ96I15 445 aa18.88■□□□□ 0.61
SCLT1-204ENST00000503215 MAF1Q9H063 256 aa18.88■□□□□ 0.61
SCLT1-204ENST00000503215 IL23AQ9NPF7 189 aa18.88■□□□□ 0.61
SCLT1-204ENST00000503215 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.87■□□□□ 0.61
SCLT1-204ENST00000503215 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.87■□□□□ 0.61
SCLT1-204ENST00000503215 SLC27A2O14975 620 aa18.87■□□□□ 0.61
SCLT1-204ENST00000503215 RGS20O76081 388 aa18.87■□□□□ 0.61
SCLT1-204ENST00000503215 FAM47CQ5HY64 1035 aa18.87■□□□□ 0.61
SCLT1-204ENST00000503215 CATIPQ7Z7H3 387 aa18.87■□□□□ 0.61
SCLT1-204ENST00000503215 PDCD2LQ9BRP1 358 aa18.87■□□□□ 0.61
SCLT1-204ENST00000503215 DDX41Q9UJV9 622 aaKnown RBP18.87■□□□□ 0.61
SCLT1-204ENST00000503215 SCN10AQ9Y5Y9 1956 aa18.87■□□□□ 0.61
SCLT1-204ENST00000503215 CDH23Q9H251 3354 aa18.87■□□□□ 0.61
SCLT1-204ENST00000503215 PRC1O43663 620 aa18.86■□□□□ 0.61
SCLT1-204ENST00000503215 SORBS3O60504 671 aa18.86■□□□□ 0.61
SCLT1-204ENST00000503215 EIF3JO75822 258 aaKnown RBP18.86■□□□□ 0.61
SCLT1-204ENST00000503215 GH1P01241 217 aa18.86■□□□□ 0.61
SCLT1-204ENST00000503215 MYCLP12524 364 aaPredicted RBP18.86■□□□□ 0.61
SCLT1-204ENST00000503215 SART3Q15020 963 aaKnown RBP18.86■□□□□ 0.61
SCLT1-204ENST00000503215 ZNF654Q8IZM8 581 aa18.86■□□□□ 0.61
SCLT1-204ENST00000503215 MYLIPQ8WY64 445 aa18.86■□□□□ 0.61
SCLT1-204ENST00000503215 KAT2BQ92831 832 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms