RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 POLR2MP0CAP2 368 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 EIF2AK2P19525 551 aaKnown RBP13.92□□□□□ -0.18
SYNE4-206ENST00000503121 SMARCA1P28370 1054 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 HOXA13P31271 388 aaPredicted RBP13.92□□□□□ -0.18
SYNE4-206ENST00000503121 HSD17B4P51659 736 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 EXOSC10Q01780 885 aaKnown RBP13.92□□□□□ -0.18
SYNE4-206ENST00000503121 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 STXBP2Q15833 593 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 MICU3Q86XE3 530 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 CMTR1Q8N1G2 835 aaKnown RBP13.92□□□□□ -0.18
SYNE4-206ENST00000503121 CCDC82Q8N4S0 544 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 FANCBQ8NB91 859 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 SCFD2Q8WU76 684 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 IWS1Q96ST2 819 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 GDF15Q99988 308 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 SPZ1Q9BXG8 430 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 UBE2OQ9C0C9 1292 aaKnown RBP13.92□□□□□ -0.18
SYNE4-206ENST00000503121 PRO3102Q9H379 93 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 MAP3K20Q9NYL2 800 aaKnown RBP13.92□□□□□ -0.18
SYNE4-206ENST00000503121 LCTP09848 1927 aa13.92□□□□□ -0.18
SYNE4-206ENST00000503121 ELP1O95163 1332 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 RBM47A0AV96 593 aaKnown RBP13.91□□□□□ -0.18
SYNE4-206ENST00000503121 DCDC2CA8MYV0 355 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 OPLAHO14841 1288 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 PLEKHA8P1O95397 391 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 TXNP10599 105 aaKnown RBP13.91□□□□□ -0.18
SYNE4-206ENST00000503121 BMP8BP34820 402 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 HSPA4P34932 840 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 NKX3-2P78367 333 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 TTLL4Q14679 1199 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 CXCL17Q6UXB2 119 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 SEPT14Q6ZU15 432 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 SGMS1Q86VZ5 419 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 FCHSD1Q86WN1 690 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 SRBD1Q8N5C6 995 aaKnown RBP13.91□□□□□ -0.18
SYNE4-206ENST00000503121 SAMD3Q8N6K7 520 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 PXMP2Q9NR77 195 aa13.91□□□□□ -0.18
SYNE4-206ENST00000503121 NAP1L2Q9ULW6 460 aaPredicted RBP13.91□□□□□ -0.18
SYNE4-206ENST00000503121 RANBP2P49792 3224 aaKnown RBP13.91□□□□□ -0.18
SYNE4-206ENST00000503121 A0A0U1RQG5 324 aaPredicted RBP13.9□□□□□ -0.18
SYNE4-206ENST00000503121 NKRFO15226 690 aaKnown RBP eCLIP13.9□□□□□ -0.186e-6■■□□□ 11.7
SYNE4-206ENST00000503121 ZBTB43O43298 467 aa13.9□□□□□ -0.18
SYNE4-206ENST00000503121 CABYRO75952 493 aa13.9□□□□□ -0.18
SYNE4-206ENST00000503121 NR3C2P08235 984 aa13.9□□□□□ -0.18
SYNE4-206ENST00000503121 CLTBP09497 229 aa13.9□□□□□ -0.18
SYNE4-206ENST00000503121 MYCLP12524 364 aaPredicted RBP13.9□□□□□ -0.18
SYNE4-206ENST00000503121 BRDTQ58F21 947 aaPredicted RBP13.9□□□□□ -0.18
SYNE4-206ENST00000503121 OR6J1Q8NGC5 347 aa13.9□□□□□ -0.18
SYNE4-206ENST00000503121 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
SYNE4-206ENST00000503121 TMEM39AQ9NV64 488 aa13.9□□□□□ -0.18
SYNE4-206ENST00000503121 SNX14Q9Y5W7 946 aa13.9□□□□□ -0.18
SYNE4-206ENST00000503121 A0A1W2PPC1 479 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 ARVCFO00192 962 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 EIF3JO75822 258 aaKnown RBP13.89□□□□□ -0.19
SYNE4-206ENST00000503121 CPA1P15085 419 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 CPT1AP50416 773 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 FXR1P51114 621 aaKnown RBP eCLIP13.89□□□□□ -0.19
SYNE4-206ENST00000503121 GHRHRQ02643 423 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 APOA5Q6Q788 366 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 BLOC1S2Q6QNY1 142 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 TMTC3Q6ZXV5 915 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 ANKRD33Q7Z3H0 272 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 SH3RF1Q7Z6J0 888 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 COPS5Q92905 334 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 KCNB2Q92953 911 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 TOX2Q96NM4 488 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 PDLIM7Q9NR12 457 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 RBM28Q9NW13 759 aaKnown RBP13.89□□□□□ -0.19
SYNE4-206ENST00000503121 BRPF3Q9ULD4 1205 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 DNAH12Q6ZR08 3092 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 MROH7Q68CQ1 1323 aa13.89□□□□□ -0.19
SYNE4-206ENST00000503121 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 hCG_1642624A0A1W2PR95 340 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 TRIM43BA6NCK2 446 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 ARIH2O95376 493 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 MYL3P08590 195 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 RAG1P15918 1043 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 PSMA5P28066 241 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 RTN1Q16799 776 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 LY6KQ17RY6 165 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 SMARCC2Q8TAQ2 1214 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 BADQ92934 168 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 CUL5Q93034 780 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 TRIM43Q96BQ3 446 aaPredicted RBP13.88□□□□□ -0.19
SYNE4-206ENST00000503121 PDCD2LQ9BRP1 358 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 POLR3EQ9NVU0 708 aa13.88□□□□□ -0.19
SYNE4-206ENST00000503121 LRRC37A2A6NM11 1700 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 GOLGA8AA7E2F4 631 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 GOLGA8BA8MQT2 603 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 TLR3O15455 904 aaKnown RBP13.87□□□□□ -0.19
SYNE4-206ENST00000503121 CDK7P50613 346 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 PSMC6P62333 389 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 FAAP100Q0VG06 881 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 ITGA7Q13683 1181 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 PGM5Q15124 567 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 Q6ZUG5 572 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 VSIG10LQ86VR7 867 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 TDHQ8IZJ6 230 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 MRVI1Q9Y6F6 885 aa13.87□□□□□ -0.19
SYNE4-206ENST00000503121 KIAA0355O15063 1070 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms