RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 USP17L6PQ6QN14 398 aa10.27□□□□□ -0.77
NR1I3-216ENST00000502848 CHST13Q8NET6 341 aa10.27□□□□□ -0.77
NR1I3-216ENST00000502848 CLEC4DQ8WXI8 215 aa10.27□□□□□ -0.77
NR1I3-216ENST00000502848 OPTNQ96CV9 577 aa10.27□□□□□ -0.77
NR1I3-216ENST00000502848 ATG4CQ96DT6 458 aa10.27□□□□□ -0.77
NR1I3-216ENST00000502848 SLC10A4Q96EP9 437 aa10.27□□□□□ -0.77
NR1I3-216ENST00000502848 OTUD5Q96G74 571 aa10.27□□□□□ -0.77
NR1I3-216ENST00000502848 GTPBP4Q9BZE4 634 aaKnown RBP10.27□□□□□ -0.77
NR1I3-216ENST00000502848 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.77
NR1I3-216ENST00000502848 ELP3Q9H9T3 547 aa10.27□□□□□ -0.77
NR1I3-216ENST00000502848 RRAGCQ9HB90 399 aa10.27□□□□□ -0.77
NR1I3-216ENST00000502848 ZCCHC17Q9NP64 241 aaKnown RBP10.27□□□□□ -0.77
NR1I3-216ENST00000502848 KCNMB3Q9NPA1 279 aa10.27□□□□□ -0.77
NR1I3-216ENST00000502848 TMEM260Q9NX78 707 aa10.27□□□□□ -0.77
NR1I3-216ENST00000502848 DDX25Q9UHL0 483 aaKnown RBP10.27□□□□□ -0.77
NR1I3-216ENST00000502848 LOC102724159A0A0B4J2E5 919 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 SYCE3A1L190 88 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 VWA3AA6NCI4 1184 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 STAM2O75886 525 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 SLC25A27O95847 323 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 CFBP00751 764 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 CETPP11597 493 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 MRE11P49959 708 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 GTF2A2P52657 109 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 IRX3P78415 501 aaPredicted RBP10.26□□□□□ -0.77
NR1I3-216ENST00000502848 PRKG1Q13976 671 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 PWP2Q15269 919 aaKnown RBP10.26□□□□□ -0.77
NR1I3-216ENST00000502848 MAP1SQ66K74 1059 aaPredicted RBP10.26□□□□□ -0.77
NR1I3-216ENST00000502848 KRBA2Q6ZNG9 492 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 IQUBQ8NA54 791 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
NR1I3-216ENST00000502848 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 CLIC6Q96NY7 704 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 SDF4Q9BRK5 362 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 FUCA2Q9BTY2 467 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 TSPY26PQ9H489 355 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 KIAA1468Q9P260 1216 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 PFASO15067 1338 aa10.26□□□□□ -0.77
NR1I3-216ENST00000502848 EDIL3O43854 480 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 MUTP22033 750 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 OSBPP22059 807 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 MOGSQ13724 837 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 CT47A1Q5JQC4 288 aaPredicted RBP10.25□□□□□ -0.77
NR1I3-216ENST00000502848 NT5DC1Q5TFE4 455 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 PCNX4Q63HM2 1172 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 SASS6Q6UVJ0 657 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 ANKRD23Q86SG2 305 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 RIOX2Q8IUF8 465 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 CEP57L1Q8IYX8 460 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 TRIML1Q8N9V2 468 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 CNNM3Q8NE01 707 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 SHCBP1Q8NEM2 672 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 SPATA20Q8TB22 786 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 CLMNQ96JQ2 1002 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 TRERF1Q96PN7 1200 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 TMEM60Q9H2L4 133 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 ACAD9Q9H845 621 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 RAVER2Q9HCJ3 691 aaKnown RBP10.25□□□□□ -0.77
NR1I3-216ENST00000502848 RNF146Q9NTX7 359 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 STK17AQ9UEE5 414 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 CCDC39Q9UFE4 941 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 TUBE1Q9UJT0 475 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 KDM3AQ9Y4C1 1321 aa10.25□□□□□ -0.77
NR1I3-216ENST00000502848 IGLV3-22A0A075B6J6 115 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 MAFGO15525 162 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 ACTN4O43707 911 aaKnown RBP10.24□□□□□ -0.77
NR1I3-216ENST00000502848 SLC37A4O43826 429 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 TDP2O95551 362 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 ITGBL1O95965 494 aaPredicted RBP10.24□□□□□ -0.77
NR1I3-216ENST00000502848 POTEIP0CG38 1075 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 POTEJP0CG39 1038 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 ALAS1P13196 640 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 STAT3P40763 770 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 UBA7P41226 1012 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 SNAP25P60880 206 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 HERVK_113P62684 666 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 TMEM132BQ14DG7 1078 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 ZRSR1Q15695 479 aaKnown RBP10.24□□□□□ -0.77
NR1I3-216ENST00000502848 E2F4Q16254 413 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 STX1AQ16623 288 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 UVSSAQ2YD98 709 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 CEP55Q53EZ4 464 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 HYIQ5T013 277 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 HAUS3Q68CZ6 603 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 SNRNP48Q6IEG0 339 aaKnown RBP10.24□□□□□ -0.77
NR1I3-216ENST00000502848 GADL1Q6ZQY3 521 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 SH3RF1Q7Z6J0 888 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 DNERQ8NFT8 737 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 ETNPPLQ8TBG4 499 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 SYTL5Q8TDW5 730 aaPredicted RBP10.24□□□□□ -0.77
NR1I3-216ENST00000502848 LENG9Q96B70 501 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 WNK4Q96J92 1243 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 RIT2Q99578 217 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 NT5C3AQ9H0P0 336 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 DISC1Q9NRI5 854 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 ANO10Q9NW15 660 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 FZD1Q9UP38 647 aa10.24□□□□□ -0.77
NR1I3-216ENST00000502848 B4DLN1 442 aa10.23□□□□□ -0.77
NR1I3-216ENST00000502848 MEIS1O00470 390 aa10.23□□□□□ -0.77
NR1I3-216ENST00000502848 NFIBO00712 420 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms