RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 CNTNAP1P78357 1384 aa6.53□□□□□ -1.36
PTPN20-212ENST00000502254 MYH2Q9UKX2 1941 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 CCDC88AQ3V6T2 1871 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 ERICH2A1L162 156 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 MPHOSPH10O00566 681 aaKnown RBP6.52□□□□□ -1.37
PTPN20-212ENST00000502254 SH2B2O14492 632 aaPredicted RBP6.52□□□□□ -1.37
PTPN20-212ENST00000502254 NRG2O14511 850 aaPredicted RBP6.52□□□□□ -1.37
PTPN20-212ENST00000502254 ORC4O43929 436 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 F11P03951 625 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 TSPY3P0CV98 308 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 TSPY8P0CW00 308 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 PCP11498 1178 aaKnown RBP6.52□□□□□ -1.37
PTPN20-212ENST00000502254 TCF3P15923 654 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 EPHX2P34913 555 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 TYRO3Q06418 890 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 TNFAIP1Q13829 316 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 TOB2Q14106 344 aaPredicted RBP6.52□□□□□ -1.37
PTPN20-212ENST00000502254 RASA3Q14644 834 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 ARSJQ5FYB0 599 aaPredicted RBP6.52□□□□□ -1.37
PTPN20-212ENST00000502254 FKBP1CQ5VVH2 108 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 PRAMEF18Q5VWM3 479 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 NLRP8Q86W28 1048 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 RAB11FIP4Q86YS3 637 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 FOXP4Q8IVH2 680 aaPredicted RBP6.52□□□□□ -1.37
PTPN20-212ENST00000502254 FBF1Q8TES7 1133 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 TMX3Q96JJ7 454 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 ZSCAN31Q96LW9 406 aaPredicted RBP6.52□□□□□ -1.37
PTPN20-212ENST00000502254 UBAC1Q9BSL1 405 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 ALDH8A1Q9H2A2 487 aaPredicted RBP6.52□□□□□ -1.37
PTPN20-212ENST00000502254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTPN20-212ENST00000502254 NEUROD4Q9HD90 331 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 RNF19AQ9NV58 838 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 PI4KBQ9UBF8 816 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 SERPINB13Q9UIV8 391 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 TPCN1Q9ULQ1 816 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 LIMCH1Q9UPQ0 1083 aa6.52□□□□□ -1.37
PTPN20-212ENST00000502254 ZNF646O15015 1829 aaPredicted RBP6.51□□□□□ -1.37
PTPN20-212ENST00000502254 PNMA6FA0A0J9YX94 578 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 KLF18A0A0U1RQI7 1052 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 A6NHS1 94 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 CCDC69A6NI79 296 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 EIF1AYO14602 144 aaKnown RBP6.51□□□□□ -1.37
PTPN20-212ENST00000502254 AXIN1O15169 862 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 NMT2O60551 498 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 LARGE1O95461 756 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 FGRP09769 529 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 SHMT1P34896 483 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 ATP2B2Q01814 1243 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 GABPAQ06546 454 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 ORC1Q13415 861 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 WTAPQ15007 396 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 SART3Q15020 963 aaKnown RBP6.51□□□□□ -1.37
PTPN20-212ENST00000502254 TRIP4Q15650 581 aaPredicted RBP6.51□□□□□ -1.37
PTPN20-212ENST00000502254 PDE12Q6L8Q7 609 aaKnown RBP6.51□□□□□ -1.37
PTPN20-212ENST00000502254 SYNE3Q6ZMZ3 975 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 MIGA2Q7L4E1 593 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 FAM83AQ86UY5 434 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 IQCA1Q86XH1 822 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 APOBEC3FQ8IUX4 373 aaKnown RBP6.51□□□□□ -1.37
PTPN20-212ENST00000502254 CCDC83Q8IWF9 413 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 NECAB1Q8N987 351 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 IGDCC4Q8TDY8 1250 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 ZNF526Q8TF50 670 aaPredicted RBP6.51□□□□□ -1.37
PTPN20-212ENST00000502254 DCPSQ96C86 337 aaKnown RBP6.51□□□□□ -1.37
PTPN20-212ENST00000502254 CHMP4CQ96CF2 233 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 TMEM87BQ96K49 555 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 DEFB129Q9H1M3 183 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 SLKQ9H2G2 1235 aaPredicted RBP6.51□□□□□ -1.37
PTPN20-212ENST00000502254 TAF1DQ9H5J8 278 aaPredicted RBP6.51□□□□□ -1.37
PTPN20-212ENST00000502254 RRAGCQ9HB90 399 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 SENP2Q9HC62 589 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 SWAP70Q9UH65 585 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 FNDC3AQ9Y2H6 1198 aaKnown RBP6.51□□□□□ -1.37
PTPN20-212ENST00000502254 ROBO3Q96MS0 1386 aa6.51□□□□□ -1.37
PTPN20-212ENST00000502254 TNKSO95271 1327 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 WDR19Q8NEZ3 1342 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 ATRNL1Q5VV63 1379 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 IQCA1LA6NCM1 817 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 GOLGA8BA8MQT2 603 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 ADM5C9JUS6 153 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 DTNBO60941 627 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 TNFRSF21O75509 655 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 GDF11O95390 407 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 AKR1B1P15121 316 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 CCT2P78371 535 aaKnown RBP6.5□□□□□ -1.37
PTPN20-212ENST00000502254 LBRQ14739 615 aaKnown RBP6.5□□□□□ -1.37
PTPN20-212ENST00000502254 ME3Q16798 604 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 SHROOM1Q2M3G4 852 aaPredicted RBP6.5□□□□□ -1.37
PTPN20-212ENST00000502254 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.5□□□□□ -1.37
PTPN20-212ENST00000502254 CERKLQ49MI3 558 aaPredicted RBP6.5□□□□□ -1.37
PTPN20-212ENST00000502254 PKDCCQ504Y2 493 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 CCDC178Q5BJE1 867 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 IFIT1BQ5T764 474 aaKnown RBP6.5□□□□□ -1.37
PTPN20-212ENST00000502254 NBPF12Q5TAG4 269 aaPredicted RBP6.5□□□□□ -1.37
PTPN20-212ENST00000502254 DLK2Q6UY11 383 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 USP50Q70EL3 339 aaPredicted RBP6.5□□□□□ -1.37
PTPN20-212ENST00000502254 USP48Q86UV5 1035 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 TTC16Q8NEE8 873 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 NEDD1Q8NHV4 660 aa6.5□□□□□ -1.37
PTPN20-212ENST00000502254 NUP133Q8WUM0 1156 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms