RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	TINF2	Q9BSI4	451 aa		12.47	□□□□□ -0.41
CDK11A-222	ENST00000498810	IL25	Q9H293	177 aa		12.47	□□□□□ -0.41
CDK11A-222	ENST00000498810	DIS3	Q9Y2L1	958 aa	Known RBP	12.47	□□□□□ -0.41
CDK11A-222	ENST00000498810	MKI67	P46013	3256 aa	Known RBP	12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	LRRC37A2	A6NM11	1700 aa		12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	SGSM2	O43147	1006 aa		12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	SEPT4	O43236	478 aa		12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	PLA2G6	O60733	806 aa		12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	CENPB	P07199	599 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	ZNF543	Q08ER8	600 aa		12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	TTBK2	Q6IQ55	1244 aa		12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	ARRDC4	Q8NCT1	418 aa		12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	NCOA7	Q8NI08	942 aa		12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	ANO2	Q9NQ90	1003 aa		12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	NRBP1	Q9UHY1	535 aa		12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	PNMA2	Q9UL42	364 aa		12.46	□□□□□ -0.41
CDK11A-222	ENST00000498810	LCT	P09848	1927 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	SYNGAP1	Q96PV0	1343 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	PTPDC1	A2A3K4	754 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810		H0YGN5	161 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	HOXA2	O43364	376 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	ICAM1	P05362	532 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	PARP1	P09874	1014 aa	Known RBP	12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	GOLGA8H	P0CJ92	632 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	AKR1A1	P14550	325 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	PTH1R	Q03431	593 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	AMHR2	Q16671	573 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	ZNF792	Q3KQV3	632 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	ASPRV1	Q53RT3	343 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	PRAMEF19	Q5SWL8	479 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	UBE2Q1	Q7Z7E8	422 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	MSL3	Q8N5Y2	521 aa	Known RBP	12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	ENAH	Q8N8S7	591 aa	Predicted RBP	12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	TRPV1	Q8NER1	839 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	MPHOSPH6	Q99547	160 aa	Known RBP	12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	XPNPEP3	Q9NQH7	507 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	PRDM9	Q9NQV7	894 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	ZSWIM5	Q9P217	1185 aa		12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	RBM8A	Q9Y5S9	174 aa	Known RBP	12.45	□□□□□ -0.42
CDK11A-222	ENST00000498810	DNM1L	O00429	736 aa		12.44	□□□□□ -0.42
CDK11A-222	ENST00000498810	IFIT3	O14879	490 aa	Known RBP	12.44	□□□□□ -0.42
CDK11A-222	ENST00000498810	NOV	P48745	357 aa		12.44	□□□□□ -0.42
CDK11A-222	ENST00000498810	USH1G	Q495M9	461 aa		12.44	□□□□□ -0.42
CDK11A-222	ENST00000498810	BMP2KL	Q5H9B9	411 aa		12.44	□□□□□ -0.42
CDK11A-222	ENST00000498810	GJC2	Q5T442	439 aa	Predicted RBP	12.44	□□□□□ -0.42
CDK11A-222	ENST00000498810	NOL8	Q76FK4	1167 aa	Known RBP	12.44	□□□□□ -0.42
CDK11A-222	ENST00000498810	HLA-C	Q95604	372 aa		12.44	□□□□□ -0.42
CDK11A-222	ENST00000498810	SENP6	Q9GZR1	1112 aa	Predicted RBP	12.44	□□□□□ -0.42
CDK11A-222	ENST00000498810	RANBP17	Q9H2T7	1088 aa	Known RBP	12.44	□□□□□ -0.42
CDK11A-222	ENST00000498810	A1CF	Q9NQ94	594 aa	Known RBP	12.44	□□□□□ -0.42
CDK11A-222	ENST00000498810	ZNF536	O15090	1300 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	CEP290	O15078	2479 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	ASB14	A6NK59	587 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	CDC45	O75419	566 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	CYP21A2	P08686	494 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	TAL1	P17542	331 aa	Predicted RBP	12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	WTAP	Q15007	396 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	CDC37	Q16543	378 aa	Predicted RBP	12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	MUM1L1	Q5H9M0	696 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	RNF20	Q5VTR2	975 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	TRAF7	Q6Q0C0	670 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	BTNL9	Q6UXG8	535 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	ARMCX2	Q7L311	632 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	RNF180	Q86T96	592 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	ESYT1	Q9BSJ8	1104 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	SPC25	Q9HBM1	224 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	PRKAG2	Q9UGJ0	569 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	FAM184B	Q9ULE4	1060 aa		12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810	FCF1	Q9Y324	198 aa	Known RBP	12.43	□□□□□ -0.42
CDK11A-222	ENST00000498810		E7EWF7	191 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	CALML3	P27482	149 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	SSTR3	P32745	418 aa	Predicted RBP	12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	PRR20E	P86478	221 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	PRR20C	P86479	221 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	PRR20D	P86480	221 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	PRR20B	P86481	221 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	PRR20A	P86496	221 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	CNTN2	Q02246	1040 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	TMEM67	Q5HYA8	995 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	ZNF697	Q5TEC3	545 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	NFXL1	Q6ZNB6	911 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	CATIP	Q7Z7H3	387 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	SKAP1	Q86WV1	359 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	CCDC144CP	Q8IYA2	1237 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	UBA5	Q9GZZ9	404 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	ABHD16B	Q9H3Z7	469 aa		12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	ADD3	Q9UEY8	706 aa	Known RBP	12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.42	□□□□□ -0.42
CDK11A-222	ENST00000498810	WDR19	Q8NEZ3	1342 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	DNAJC25-GNG10	A0A024R161	153 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810		B4DLN1	442 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	SNHG28	P0DPA3	235 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	RPIA	P49247	311 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	MRPL12	P52815	198 aa	Known RBP	12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	ACVR2B	Q13705	512 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	RNF207	Q6ZRF8	634 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	CYB5R4	Q7L1T6	521 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	CHST3	Q7LGC8	479 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	NUP133	Q8WUM0	1156 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	MAP4K1	Q92918	833 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms