RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 EFCC1Q9HA90 598 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 VAT1LQ9HCJ6 419 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 CAPN11Q9UMQ6 739 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 FLT1P17948 1338 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 MYBL2P10244 700 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 NPR1P16066 1061 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 STIM1Q13586 685 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 LETM2Q2VYF4 491 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 MAP9Q49MG5 647 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 PLCD3Q8N3E9 789 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 ZNF287Q9HBT7 754 aa18.27■□□□□ 0.52
COL6A1-206ENST00000498614 GPR75-ASB3A0A0A6YYF3 556 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 TARSL2A2RTX5 802 aaKnown RBP18.26■□□□□ 0.51
COL6A1-206ENST00000498614 PDE2AO00408 941 aaPredicted RBP18.26■□□□□ 0.51
COL6A1-206ENST00000498614 ZNF185O15231 689 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 C15orf52Q6ZUT6 534 aaKnown RBP18.26■□□□□ 0.51
COL6A1-206ENST00000498614 KIAA1328Q86T90 577 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 JAKMIP2Q96AA8 810 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 MASTLQ96GX5 879 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 CRAMP1Q96RY5 1269 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 LACRTQ9GZZ8 138 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 MTFR1LQ9H019 292 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 GGA1Q9UJY5 639 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 A0A1W2PQC6 194 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 KLRC4O43908 158 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 CCNT1O60563 726 aaKnown RBP18.26■□□□□ 0.51
COL6A1-206ENST00000498614 MCM3P25205 808 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 GGCXP38435 758 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 MFSD14BQ5SR56 506 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.26■□□□□ 0.51
COL6A1-206ENST00000498614 CEP95Q96GE4 821 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 LZTS2Q9BRK4 669 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 SPZ1Q9BXG8 430 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 ZMYND12Q9H0C1 365 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 MYH1P12882 1939 aa18.26■□□□□ 0.51
COL6A1-206ENST00000498614 SMCO2A6NFE2 343 aa18.25■□□□□ 0.51
COL6A1-206ENST00000498614 PPEF1O14829 653 aaPredicted RBP18.25■□□□□ 0.51
COL6A1-206ENST00000498614 BBOX1O75936 387 aa18.25■□□□□ 0.51
COL6A1-206ENST00000498614 CORO7P57737 925 aa18.25■□□□□ 0.51
COL6A1-206ENST00000498614 TSR1Q2NL82 804 aaKnown RBP18.25■□□□□ 0.51
COL6A1-206ENST00000498614 PACS2Q86VP3 889 aa18.25■□□□□ 0.51
COL6A1-206ENST00000498614 NEDD1Q8NHV4 660 aa18.25■□□□□ 0.51
COL6A1-206ENST00000498614 CCSER1Q9C0I3 900 aa18.25■□□□□ 0.51
COL6A1-206ENST00000498614 PPFIA4O75335 1185 aa18.25■□□□□ 0.51
COL6A1-206ENST00000498614 IL1R1P14778 569 aa18.25■□□□□ 0.51
COL6A1-206ENST00000498614 ATP2B4P23634 1241 aa18.25■□□□□ 0.51
COL6A1-206ENST00000498614 AGPAT5Q9NUQ2 364 aa18.25■□□□□ 0.51
COL6A1-206ENST00000498614 DUSP10Q9Y6W6 482 aa18.25■□□□□ 0.51
COL6A1-206ENST00000498614 COL11A2P13942 1736 aaPredicted RBP18.24■□□□□ 0.51
COL6A1-206ENST00000498614 B4DLN1 442 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 AGPSO00116 658 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 PLCG1P19174 1290 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 KLK7P49862 253 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 RHBDL3P58872 404 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 KRT83P78385 493 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 CKAP4Q07065 602 aaKnown RBP18.24■□□□□ 0.51
COL6A1-206ENST00000498614 NONOQ15233 471 aaKnown RBP eCLIP18.24■□□□□ 0.51
COL6A1-206ENST00000498614 MEA1Q16626 185 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 CABP7Q86V35 215 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 CAGE1Q8TC20 777 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 PIGSQ96S52 555 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 UBA5Q9GZZ9 404 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 KBTBD4Q9NVX7 518 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 RASSF10A6NK89 507 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 LAD1O00515 517 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 OR52Z1P0C646 297 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 EEF1GP26641 437 aaKnown RBP18.24■□□□□ 0.51
COL6A1-206ENST00000498614 CCNI2Q6ZMN8 369 aaPredicted RBP18.24■□□□□ 0.51
COL6A1-206ENST00000498614 ZNF662Q6ZS27 426 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 KRT25Q7Z3Z0 450 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 RRP36Q96EU6 259 aaKnown RBP18.24■□□□□ 0.51
COL6A1-206ENST00000498614 HINFPQ9BQA5 517 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 SELENOOQ9BVL4 669 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 POLLQ9UGP5 575 aa18.24■□□□□ 0.51
COL6A1-206ENST00000498614 KRT86O43790 486 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 ALDH1B1P30837 517 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 PRPHP41219 470 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 C2orf54Q08AI8 447 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 KCNB1Q14721 858 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 SKIDA1Q1XH10 827 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 TTC31Q49AM3 519 aaPredicted RBP18.23■□□□□ 0.51
COL6A1-206ENST00000498614 EEF2KMTQ96G04 330 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 RPGRIP1Q96KN7 1286 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 TRIM47Q96LD4 638 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 CRACR2AQ9BSW2 395 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 THAP9Q9H5L6 903 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 C6orf50Q9HD87 102 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 SEC63Q9UGP8 760 aaKnown RBP18.23■□□□□ 0.51
COL6A1-206ENST00000498614 USP17L5A8MUK1 530 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 RHOBTB3O94955 611 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 SOGA3Q5TF21 947 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 EHBP1Q8NDI1 1231 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 TTYH3Q9C0H2 523 aa18.23■□□□□ 0.51
COL6A1-206ENST00000498614 NHEJ1Q9H9Q4 299 aaPredicted RBP18.23■□□□□ 0.51
COL6A1-206ENST00000498614 BIN2Q9UBW5 565 aaPredicted RBP18.23■□□□□ 0.51
COL6A1-206ENST00000498614 DPEP1P16444 411 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 PLCG2P16885 1265 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 POLD1P28340 1107 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 TECP42680 631 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 CYP27A1Q02318 531 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms