RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 SLFN14P0C7P3 912 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 UBA7P41226 1012 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 AFMP43652 599 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 HIRAP54198 1017 aaPredicted RBP9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 TPM4P67936 248 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 DGKZQ13574 1117 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 E2F4Q16254 413 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 SUPT20HL1Q3ZLR7 823 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 PRAMEF18Q5VWM3 479 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 PPP4R3AQ6IN85 833 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 MOXD1Q6UVY6 613 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 CABP7Q86V35 215 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 TEX2Q8IWB9 1127 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 SULF1Q8IWU6 871 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 TRIML1Q8N9V2 468 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 IQUBQ8NA54 791 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 DCPSQ96C86 337 aaKnown RBP9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 L3MBTL3Q96JM7 780 aaPredicted RBP9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 BPIFA3Q9BQP9 254 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 RAB34Q9BZG1 259 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 CCSER1Q9C0I3 900 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 RPAP3Q9H6T3 665 aaPredicted RBP9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 MAGEF1Q9HAY2 307 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 CCDC39Q9UFE4 941 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 ZNF112Q9UJU3 913 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 MAN1B1Q9UKM7 699 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 CCPG1Q9ULG6 757 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 FZD1Q9UP38 647 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 MRPL11Q9Y3B7 192 aaKnown RBP9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 CTDP1Q9Y5B0 961 aaPredicted RBP9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 SIP14410 1827 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 SYNRGQ9UMZ2 1314 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 KDM3AQ9Y4C1 1321 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 POTEMA6NI47 508 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 PIK3CDO00329 1044 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 OPLAHO14841 1288 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 MARCH6O60337 910 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 FLOT1O75955 427 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 ADCY5O95622 1261 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 CFBP00751 764 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 ICAM1P05362 532 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 PTPRAP18433 802 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 SREBF1P36956 1147 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 ARHGAP4P98171 946 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 IQCB1Q15051 598 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 GPR162Q16538 588 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 PDXDC2PQ6P474 469 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 DHX40Q8IX18 779 aaKnown RBP9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 ZNF280CQ8ND82 737 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 ZKSCAN4Q969J2 545 aaPredicted RBP9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 KLRG1Q96E93 195 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 CALML4Q96GE6 196 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 CDK5RAP3Q96JB5 506 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 WDR18Q9BV38 432 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 PPP1R9AQ9ULJ8 1098 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 PCDHA5Q9Y5H7 936 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 MGAMO43451 1857 aa9.11□□□□□ -0.95
PDZRN3-212ENST00000498048 ZSWIM8A7E2V4 1837 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 GCOM1H8Y6P7 765 aaPredicted RBP9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 POLR2MP0CAP2 368 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 PLCG1P19174 1290 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 CDC25AP30304 524 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 HOXA13P31271 388 aaPredicted RBP9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 EPHX2P34913 555 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 NF2P35240 595 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 TECP42680 631 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 TXKP42681 527 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 HMGCS2P54868 508 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 BACE1P56817 501 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 DPYDQ12882 1025 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 MKRN3Q13064 507 aaKnown RBP9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 SPP2Q13103 211 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 PRKG1Q13976 671 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 NT5DC1Q5TFE4 455 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 RRAGBQ5VZM2 374 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 ISM2Q6H9L7 571 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 DPY19L2Q6NUT2 758 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 SH3RF1Q7Z6J0 888 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 FCHSD1Q86WN1 690 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 LDHDQ86WU2 507 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 IGSF22Q8N9C0 903 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 PRPF38AQ8NAV1 312 aaKnown RBP9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 SNX29Q8TEQ0 813 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 PAGE5Q96GU1 130 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 C12orf42Q96LP6 360 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 MTMR9Q96QG7 549 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 CUEDC2Q9H467 287 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 RYDENQ9NUL5 291 aaKnown RBP9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 CSADQ9Y600 493 aa9.1□□□□□ -0.95
PDZRN3-212ENST00000498048 ZNF536O15090 1300 aa9.09□□□□□ -0.95
PDZRN3-212ENST00000498048 SMTNL1A8MU46 457 aa9.09□□□□□ -0.95
PDZRN3-212ENST00000498048 CASP1P29466 404 aa9.09□□□□□ -0.95
PDZRN3-212ENST00000498048 USP11P51784 963 aa9.09□□□□□ -0.95
PDZRN3-212ENST00000498048 MDM2Q00987 491 aaPredicted RBP9.09□□□□□ -0.95
PDZRN3-212ENST00000498048 MYL5Q02045 173 aa9.09□□□□□ -0.95
PDZRN3-212ENST00000498048 VGLL4Q14135 290 aa9.09□□□□□ -0.95
PDZRN3-212ENST00000498048 MORC3Q14149 939 aa9.09□□□□□ -0.95
PDZRN3-212ENST00000498048 SARM1Q6SZW1 724 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms