RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 CCDC39Q9UFE4 941 aa20.09■□□□□ 0.81
CHRNA4-206ENST00000498043 COL11A1P12107 1806 aaPredicted RBP20.08■□□□□ 0.81
CHRNA4-206ENST00000498043 SCN4AP35499 1836 aa20.08■□□□□ 0.81
CHRNA4-206ENST00000498043 SMC2O95347 1197 aa20.08■□□□□ 0.81
CHRNA4-206ENST00000498043 PLCG1P19174 1290 aa20.08■□□□□ 0.81
CHRNA4-206ENST00000498043 NAALADL2Q58DX5 795 aa20.08■□□□□ 0.81
CHRNA4-206ENST00000498043 SPATA20Q8TB22 786 aa20.08■□□□□ 0.81
CHRNA4-206ENST00000498043 TRIM44Q96DX7 344 aaPredicted RBP20.08■□□□□ 0.81
CHRNA4-206ENST00000498043 BLZF1Q9H2G9 400 aa20.08■□□□□ 0.81
CHRNA4-206ENST00000498043 LRWD1Q9UFC0 647 aa20.08■□□□□ 0.81
CHRNA4-206ENST00000498043 RLFQ13129 1914 aa20.08■□□□□ 0.8
CHRNA4-206ENST00000498043 DPYDQ12882 1025 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 PRR16Q569H4 304 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 EAPPQ56P03 285 aaPredicted RBP20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 LRRC15Q8TF66 581 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 WNK4Q96J92 1243 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 BPIFA3Q9BQP9 254 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 MMTAG2Q9BU76 263 aaKnown RBP20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 RAB34Q9BZG1 259 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 HOMER2Q9NSB8 354 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 ZC3H4Q9UPT8 1303 aaKnown RBP20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 PTPRFP10586 1907 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 CYP3A7-CYP3A51PA0A087WV96 503 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 PPP1R12BO60237 982 aaPredicted RBP20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 ALAS1P13196 640 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 CYP3A7P24462 503 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 MOXD1Q6UVY6 613 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 ATG4CQ96DT6 458 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 CDCA5Q96FF9 252 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 C12orf42Q96LP6 360 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 MBOAT7Q96N66 472 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 AFG3L2Q9Y4W6 797 aa20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 CTDP1Q9Y5B0 961 aaPredicted RBP20.07■□□□□ 0.8
CHRNA4-206ENST00000498043 C19orf81C9J6K1 198 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 FAM86B1E9PN63 330 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 NFIBO00712 420 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 GRIN3BO60391 1043 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 FAM86B2P0C5J1 330 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 MAP3K9P80192 1104 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 MORC3Q14149 939 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 CNKSR2Q8WXI2 1034 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 KCNMB3Q9NPA1 279 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 CSADQ9Y600 493 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 UBXN2AP68543 259 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 CUL4BQ13620 913 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 TRIML1Q8N9V2 468 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 TMOD4Q9NZQ9 345 aa20.06■□□□□ 0.8
CHRNA4-206ENST00000498043 TEX2Q8IWB9 1127 aa20.05■□□□□ 0.8
CHRNA4-206ENST00000498043 LENG9Q96B70 501 aa20.05■□□□□ 0.8
CHRNA4-206ENST00000498043 VWA5AO00534 786 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 GTPBP6O43824 516 aaPredicted RBP20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 ZBED4O75132 1171 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 IREB2P48200 963 aaKnown RBP20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 SNX29Q8TEQ0 813 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 ZC3H15Q8WU90 426 aaKnown RBP20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 CLEC4DQ8WXI8 215 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 CALML4Q96GE6 196 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 TAF1DQ9H5J8 278 aaPredicted RBP20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 PCDHA12Q9UN75 941 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 ZNF76P36508 570 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 PDIA5Q14554 519 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 Q4G0T1 1027 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 MUM1L1Q5H9M0 696 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 MOB2Q70IA6 237 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 CYP2W1Q8TAV3 490 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 ETNPPLQ8TBG4 499 aa20.04■□□□□ 0.8
CHRNA4-206ENST00000498043 NF2P35240 595 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 HSD17B4P51659 736 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 TTLL12Q14166 644 aaPredicted RBP20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 CDK5RAP3Q96JB5 506 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 GSDMAQ96QA5 445 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 ELP3Q9H9T3 547 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 IQCA1LA6NCM1 817 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 CYP3A4P08684 503 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 CIITAP33076 1130 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 GRB10Q13322 594 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 KRT79Q5XKE5 535 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 CLMNQ96JQ2 1002 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 NUDT12Q9BQG2 462 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 TRIM5Q9C035 493 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 CUEDC2Q9H467 287 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 EHMT1Q9H9B1 1298 aa20.03■□□□□ 0.8
CHRNA4-206ENST00000498043 NCAPHQ15003 741 aa20.02■□□□□ 0.8
CHRNA4-206ENST00000498043 SLFN12Q8IYM2 578 aa20.02■□□□□ 0.8
CHRNA4-206ENST00000498043 MLKLQ8NB16 471 aa20.02■□□□□ 0.8
CHRNA4-206ENST00000498043 PNMA5Q96PV4 448 aa20.02■□□□□ 0.8
CHRNA4-206ENST00000498043 KBTBD4Q9NVX7 518 aa20.02■□□□□ 0.8
CHRNA4-206ENST00000498043 COL20A1Q9P218 1284 aa20.02■□□□□ 0.8
CHRNA4-206ENST00000498043 POTECB2RU33 542 aa20.01■□□□□ 0.79
CHRNA4-206ENST00000498043 PTMAP06454 111 aaKnown RBP20.01■□□□□ 0.79
CHRNA4-206ENST00000498043 STAT3P40763 770 aa20.01■□□□□ 0.79
CHRNA4-206ENST00000498043 MYL5Q02045 173 aa20.01■□□□□ 0.79
CHRNA4-206ENST00000498043 SMYD4Q8IYR2 804 aaPredicted RBP20.01■□□□□ 0.79
CHRNA4-206ENST00000498043 RBM46Q8TBY0 533 aaKnown RBP20.01■□□□□ 0.79
CHRNA4-206ENST00000498043 OTUD5Q96G74 571 aa20.01■□□□□ 0.79
CHRNA4-206ENST00000498043 MAGEF1Q9HAY2 307 aa20.01■□□□□ 0.79
CHRNA4-206ENST00000498043 DACH1Q9UI36 760 aa20.01■□□□□ 0.79
CHRNA4-206ENST00000498043 LOC285556D6RIA3 1793 aa20.01■□□□□ 0.79
CHRNA4-206ENST00000498043 IGLV3-22A0A075B6J6 115 aa20.01■□□□□ 0.79
CHRNA4-206ENST00000498043 IKBKBO14920 756 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms