RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 FIBCD1Q8N539 461 aa4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 ZNF655Q8N720 491 aaPredicted RBP4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 BRF1Q92994 677 aa4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 ZNF669Q96BR6 464 aaPredicted RBP4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 TCTN2Q96GX1 697 aa4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 SRPK1Q96SB4 655 aaKnown RBP4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 IER2Q9BTL4 223 aa4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 UBA5Q9GZZ9 404 aa4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 TERF2IPQ9NYB0 399 aa4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 ZSWIM5Q9P217 1185 aa4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 EMC9Q9Y3B6 208 aa4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 UNC80Q8N2C7 3258 aa4.83□□□□□ -1.64
EXOSC3-208ENST00000496910 A0A0U1RQG5 324 aaPredicted RBP4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 A0A1W2PQU0 124 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 PPP1R12AO14974 1030 aaPredicted RBP4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 DIAPH1O60610 1272 aaKnown RBP4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 ZNF205O95201 554 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 ITGAVP06756 1048 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 ITGA4P13612 1032 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 PAX3P23760 479 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 LBX1P52954 281 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 TEKQ02763 1124 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 FAM50AQ14320 339 aaKnown RBP4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 RTP2Q5QGT7 225 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 ARTNQ5T4W7 220 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 ARHGAP27Q6ZUM4 889 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 TMPRSS7Q7RTY8 843 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 RAVER1Q8IY67 606 aaKnown RBP4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 LINC00116Q8NCU8 138 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 ADCY4Q8NFM4 1077 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 ASB11Q8WXH4 323 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 G6PC3Q9BUM1 346 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 EPN3Q9H201 632 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 TRIT1Q9H3H1 467 aaKnown RBP4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 FANCLQ9NW38 375 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 GPATCH2Q9NW75 528 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 EBF1Q9UH73 591 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 ZMYM5Q9UJ78 669 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 ADAMTS6Q9UKP5 1117 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 FBXL21Q9UKT6 434 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 THRAP3Q9Y2W1 955 aaKnown RBP4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 R3HCC1Q9Y3T6 440 aaKnown RBP4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 PCDHA11Q9Y5I1 949 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 RGPD1P0DJD0 1748 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 ZMYM4Q5VZL5 1548 aa4.82□□□□□ -1.64
EXOSC3-208ENST00000496910 ZCCHC6Q5VYS8 1495 aaKnown RBP4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 CHD8Q9HCK8 2581 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 ADCY9O60503 1353 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 MAFGO15525 162 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 PRC1O43663 620 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 FUT4P22083 530 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 BMP8BP34820 402 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 GRB10Q13322 594 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 C4orf46Q504U0 113 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 ODR4Q5SWX8 454 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 TSHZ1Q6ZSZ6 1077 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 TRIM59Q8IWR1 403 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 STK11IPQ8N1F8 1099 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 LILRB2Q8N423 598 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 NME8Q8N427 588 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 RPS6KC1Q96S38 1066 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 SLC12A9Q9BXP2 914 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 GBP3Q9H0R5 595 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 NOL6Q9H6R4 1146 aaKnown RBP4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 SP110Q9HB58 689 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 ARHGEF4Q9NR80 690 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 TYW1Q9NV66 732 aaKnown RBP4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 C19orf73Q9NVV2 129 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 DUSP13Q9UII6 198 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 SLC5A6Q9Y289 635 aa4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 DIS3Q9Y2L1 958 aaKnown RBP4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 DNMT1P26358 1616 aaKnown RBP4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 DENND4BO75064 1496 aaPredicted RBP4.81□□□□□ -1.64
EXOSC3-208ENST00000496910 FHAD1B1AJZ9 1412 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 TRANK1O15050 2925 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 DHX57Q6P158 1386 aaKnown RBP4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 MEIS1O00470 390 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 CDC45O75419 566 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 GSNP06396 782 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 VAV1P15498 845 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 GRIA2P42262 883 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 CHMP4BP1P59074 171 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 BIRC2Q13490 618 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 BVESQ8NE79 360 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 SH3TC2Q8TF17 1288 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 C1orf159Q96HA4 380 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 C8orf48Q96LL4 319 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 DNAJC7Q99615 494 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 APBA2Q99767 749 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 FOXP3Q9BZS1 431 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 LMCD1Q9NZU5 365 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 LAS1LQ9Y4W2 734 aaKnown RBP4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 EFCAB6Q5THR3 1501 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 ATP10AO60312 1499 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 MAGI2Q86UL8 1455 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 NPHP4O75161 1426 aaPredicted RBP4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 IQGAP1P46940 1657 aa4.8□□□□□ -1.64
EXOSC3-208ENST00000496910 VCANP13611 3396 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 TNIKQ9UKE5 1360 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 KDM5DQ9BY66 1539 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms