RNA–Protein interactions for RNA: ENST00000496744.5

ECM1-206, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-206ENST00000496744 SGMS1Q86VZ5 419 aa12.66□□□□□ -0.38
ECM1-206ENST00000496744 TDHQ8IZJ6 230 aa12.66□□□□□ -0.38
ECM1-206ENST00000496744 SRBD1Q8N5C6 995 aaKnown RBP12.66□□□□□ -0.38
ECM1-206ENST00000496744 BADQ92934 168 aa12.66□□□□□ -0.38
ECM1-206ENST00000496744 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
ECM1-206ENST00000496744 IWS1Q96ST2 819 aa12.66□□□□□ -0.38
ECM1-206ENST00000496744 RMDN3Q96TC7 470 aa12.66□□□□□ -0.38
ECM1-206ENST00000496744 SPZ1Q9BXG8 430 aa12.66□□□□□ -0.38
ECM1-206ENST00000496744 PRDM5Q9NQX1 630 aaPredicted RBP12.66□□□□□ -0.38
ECM1-206ENST00000496744 MAP3K20Q9NYL2 800 aaKnown RBP12.66□□□□□ -0.38
ECM1-206ENST00000496744 PRKAG2Q9UGJ0 569 aa12.66□□□□□ -0.38
ECM1-206ENST00000496744 MYH6P13533 1939 aa12.66□□□□□ -0.38
ECM1-206ENST00000496744 LAMA2P24043 3122 aaKnown RBP12.66□□□□□ -0.38
ECM1-206ENST00000496744 LTBP2Q14767 1821 aa12.65□□□□□ -0.38
ECM1-206ENST00000496744 PLEKHA8P1O95397 391 aa12.65□□□□□ -0.38
ECM1-206ENST00000496744 RXRAP19793 462 aa12.65□□□□□ -0.38
ECM1-206ENST00000496744 HOXA13P31271 388 aaPredicted RBP12.65□□□□□ -0.38
ECM1-206ENST00000496744 LRIT3Q3SXY7 679 aa12.65□□□□□ -0.38
ECM1-206ENST00000496744 RNF20Q5VTR2 975 aa12.65□□□□□ -0.38
ECM1-206ENST00000496744 FAM126BQ8IXS8 530 aa12.65□□□□□ -0.38
ECM1-206ENST00000496744 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
ECM1-206ENST00000496744 SCFD2Q8WU76 684 aa12.65□□□□□ -0.38
ECM1-206ENST00000496744 COPS5Q92905 334 aa12.65□□□□□ -0.38
ECM1-206ENST00000496744 LRCH3Q96II8 777 aa12.65□□□□□ -0.38
ECM1-206ENST00000496744 MPHOSPH6Q99547 160 aaKnown RBP12.65□□□□□ -0.38
ECM1-206ENST00000496744 LBHD1Q9BQE6 289 aaPredicted RBP12.65□□□□□ -0.38
ECM1-206ENST00000496744 PXMP2Q9NR77 195 aa12.65□□□□□ -0.38
ECM1-206ENST00000496744 TBX21Q9UL17 535 aa12.65□□□□□ -0.38
ECM1-206ENST00000496744 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
ECM1-206ENST00000496744 CCDC69A6NI79 296 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 A6NJR5 290 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 DCDC2CA8MYV0 355 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 B4DLN1 442 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 CABYRO75952 493 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 RGS20O76081 388 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 CD4P01730 458 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 NR3C2P08235 984 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 TXNP10599 105 aaKnown RBP12.64□□□□□ -0.39
ECM1-206ENST00000496744 EIF2AK2P19525 551 aaKnown RBP12.64□□□□□ -0.39
ECM1-206ENST00000496744 KIF5BP33176 963 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 MRPL12P52815 198 aaKnown RBP12.64□□□□□ -0.39
ECM1-206ENST00000496744 EPHB4P54760 987 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 STXBP2Q15833 593 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 ARHGEF16Q5VV41 709 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 NFXL1Q6ZNB6 911 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 DHX32Q7L7V1 743 aaKnown RBP12.64□□□□□ -0.39
ECM1-206ENST00000496744 RAB11FIP4Q86YS3 637 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 SAMD3Q8N6K7 520 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 FANCBQ8NB91 859 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 CTCFLQ8NI51 663 aaPredicted RBP12.64□□□□□ -0.39
ECM1-206ENST00000496744 PIBF1Q8WXW3 757 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 VTI1AQ96AJ9 217 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 PDCD2LQ9BRP1 358 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 TMEM39AQ9NV64 488 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 BRPF3Q9ULD4 1205 aa12.64□□□□□ -0.39
ECM1-206ENST00000496744 NKRFO15226 690 aaKnown RBP eCLIP12.63□□□□□ -0.39
ECM1-206ENST00000496744 ZEB2O60315 1214 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 EIF3JO75822 258 aaKnown RBP12.63□□□□□ -0.39
ECM1-206ENST00000496744 NEFLP07196 543 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 HSPA4P34932 840 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 PSMC6P62333 389 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 PURAQ00577 322 aaKnown RBP12.63□□□□□ -0.39
ECM1-206ENST00000496744 TRAF1Q13077 416 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 ITGA7Q13683 1181 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 TTLL4Q14679 1199 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 PPP2R5BQ15173 497 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 LY6KQ17RY6 165 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 SEPT14Q6ZU15 432 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 VSIG10LQ86VR7 867 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 OR6J1Q8NGC5 347 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 IL31RAQ8NI17 732 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 LZTS2Q9BRK4 669 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 DDX41Q9UJV9 622 aaKnown RBP12.63□□□□□ -0.39
ECM1-206ENST00000496744 SLC12A7Q9Y666 1083 aa12.63□□□□□ -0.39
ECM1-206ENST00000496744 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 GCOM1H8Y6P7 765 aaPredicted RBP12.62□□□□□ -0.39
ECM1-206ENST00000496744 TIMP1P01033 207 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 POLR2MP0CAP2 368 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 CALM1P0DP23 149 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 CALM2P0DP24 149 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 CALM3P0DP25 149 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 GNAQP50148 359 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 CPT1AP50416 773 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 ARHGAP1Q07960 439 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 FUT2Q10981 343 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 PGM5Q15124 567 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 SHHQ15465 462 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 C9orf50Q5SZB4 431 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 APOA5Q6Q788 366 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 TMTC3Q6ZXV5 915 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 RRP36Q96EU6 259 aaKnown RBP12.62□□□□□ -0.39
ECM1-206ENST00000496744 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
ECM1-206ENST00000496744 PPP4R2Q9NY27 417 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 SNX14Q9Y5W7 946 aa12.62□□□□□ -0.39
ECM1-206ENST00000496744 hCG_1642624A0A1W2PR95 340 aa12.61□□□□□ -0.39
ECM1-206ENST00000496744 MEIS2O14770 477 aa12.61□□□□□ -0.39
ECM1-206ENST00000496744 CPA1P15085 419 aa12.61□□□□□ -0.39
ECM1-206ENST00000496744 RAG1P15918 1043 aa12.61□□□□□ -0.39
ECM1-206ENST00000496744 KRT32Q14532 448 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms