RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 RAD54LQ92698 747 aa14.6□□□□□ -0.07
GARNL3-220ENST00000496711 DUSP9Q99956 384 aaKnown RBP14.6□□□□□ -0.07
GARNL3-220ENST00000496711 LRRC27Q9C0I9 530 aa14.6□□□□□ -0.07
GARNL3-220ENST00000496711 STK32BQ9NY57 414 aa14.6□□□□□ -0.07
GARNL3-220ENST00000496711 PCDHA1Q9Y5I3 950 aa14.6□□□□□ -0.07
GARNL3-220ENST00000496711 ADGRG1Q9Y653 693 aa14.6□□□□□ -0.07
GARNL3-220ENST00000496711 PVALEFA0A1B0GWK0 134 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 FCER1AP12319 257 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 SIAH1Q8IUQ4 282 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 TMTC1Q8IUR5 882 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 MB21D1Q8N884 522 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 KIAA0895Q8NCT3 520 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 HAS1Q92839 578 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 GMCL1Q96IK5 515 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 ANO3Q9BYT9 981 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 MRPL44Q9H9J2 332 aaKnown RBP14.59□□□□□ -0.07
GARNL3-220ENST00000496711 MYMKA6NI61 221 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 YDJCA8MPS7 323 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 MARCH6O60337 910 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 HOXA7P31268 230 aaPredicted RBP14.59□□□□□ -0.07
GARNL3-220ENST00000496711 CASQ1P31415 396 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 GNG11P61952 73 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 AP3B2Q13367 1082 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.59□□□□□ -0.07
GARNL3-220ENST00000496711 V9GYY5 206 aaPredicted RBP14.59□□□□□ -0.07
GARNL3-220ENST00000496711 KDM3AQ9Y4C1 1321 aa14.59□□□□□ -0.07
GARNL3-220ENST00000496711 USP17L15C9J2P7 530 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 USP17L13C9JLJ4 530 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 USP17L11C9JVI0 530 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 USP17L18D6R9N7 530 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 USP17L22D6RA61 530 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 USP17L17D6RBQ6 530 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 USP17L19D6RCP7 530 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 USP17L20D6RJB6 530 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 F5H6K3 240 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 URI1O94763 535 aaPredicted RBP14.58□□□□□ -0.08
GARNL3-220ENST00000496711 DNM2P50570 870 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 KLRC3Q07444 240 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 USP17L24Q0WX57 530 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 ELF2Q15723 593 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 RBM26Q5T8P6 1007 aaKnown RBP14.58□□□□□ -0.08
GARNL3-220ENST00000496711 ANKRD40Q6AI12 368 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 USP17L6PQ6QN14 398 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 ZNF507Q8TCN5 953 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 CNOT6LQ96LI5 555 aaKnown RBP14.58□□□□□ -0.08
GARNL3-220ENST00000496711 CSRNP1Q96S65 589 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 ARID3AQ99856 593 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 NUDT12Q9BQG2 462 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 AMNQ9BXJ7 453 aa14.58□□□□□ -0.08
GARNL3-220ENST00000496711 PES1O00541 588 aaKnown RBP14.57□□□□□ -0.08
GARNL3-220ENST00000496711 NDUFB10O96000 172 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 PRKCSHP14314 528 aaPredicted RBP14.57□□□□□ -0.08
GARNL3-220ENST00000496711 USP11P51784 963 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 ERVK-24P63145 666 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 EZH2Q15910 746 aaKnown RBP14.57□□□□□ -0.08
GARNL3-220ENST00000496711 MCTP2Q6DN12 878 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 MOXD1Q6UVY6 613 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 CYP26C1Q6V0L0 522 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 PRMT6Q96LA8 375 aaPredicted RBP14.57□□□□□ -0.08
GARNL3-220ENST00000496711 WDR24Q96S15 920 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 TUBGCP2Q9BSJ2 902 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 SLC39A2Q9NP94 309 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 TMOD2Q9NZR1 351 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 PCDHA12Q9UN75 941 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 SLC26A4O43511 780 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 C21orf2O43822 256 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 GH2P01242 217 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 KRT9P35527 623 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 GRIPAP1Q4V328 841 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 HYIQ5T013 277 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 SYDE2Q5VT97 1194 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 DYMQ7RTS9 669 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 KCNK18Q7Z418 384 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 ZNF397Q8NF99 534 aaPredicted RBP14.57□□□□□ -0.08
GARNL3-220ENST00000496711 HPS3Q969F9 1004 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 KIFC2Q96AC6 838 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 MBOAT7Q96N66 472 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 NT5C3AQ9H0P0 336 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 HERC5Q9UII4 1024 aaKnown RBP14.57□□□□□ -0.08
GARNL3-220ENST00000496711 SYNPO2Q9UMS6 1093 aa14.57□□□□□ -0.08
GARNL3-220ENST00000496711 CYP3A7-CYP3A51PA0A087WV96 503 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 B4DLN1 442 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 RNF225M0QZC1 329 aaPredicted RBP14.56□□□□□ -0.08
GARNL3-220ENST00000496711 MEIS2O14770 477 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 BMP3P12645 472 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 CYP3A7P24462 503 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 IKQ13123 557 aaPredicted RBP14.56□□□□□ -0.08
GARNL3-220ENST00000496711 CENPPQ6IPU0 288 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 FBXO11Q86XK2 927 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 GUF1Q8N442 669 aaKnown RBP14.56□□□□□ -0.08
GARNL3-220ENST00000496711 LRRN4CLQ8ND94 238 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 CAMKK2Q96RR4 588 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 KCNMB3Q9NPA1 279 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 LZTFL1Q9NQ48 299 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 ATAD5Q96QE3 1844 aa14.56□□□□□ -0.08
GARNL3-220ENST00000496711 TTC26A0AVF1 554 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 MTIF2P46199 727 aaKnown RBP14.55□□□□□ -0.08
GARNL3-220ENST00000496711 EN1Q05925 392 aaPredicted RBP14.55□□□□□ -0.08
GARNL3-220ENST00000496711 PSMD2Q13200 908 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 RSBN1LQ6PCB5 846 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms