RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 PTH1RQ03431 593 aa15.1■□□□□ 0.01
FN1-226ENST00000496542 SEC23AQ15436 765 aa15.1■□□□□ 0.01
FN1-226ENST00000496542 BRDTQ58F21 947 aaPredicted RBP15.1■□□□□ 0.01
FN1-226ENST00000496542 PSRC1Q6PGN9 363 aaPredicted RBP15.1■□□□□ 0.01
FN1-226ENST00000496542 ZNF365Q70YC5 407 aa15.1■□□□□ 0.01
FN1-226ENST00000496542 MCF2L2Q86YR7 1114 aa15.1■□□□□ 0.01
FN1-226ENST00000496542 STAG2Q8N3U4 1231 aa15.1■□□□□ 0.01
FN1-226ENST00000496542 SYTL5Q8TDW5 730 aaPredicted RBP15.1■□□□□ 0.01
FN1-226ENST00000496542 MYLIPQ8WY64 445 aa15.1■□□□□ 0.01
FN1-226ENST00000496542 NOC4LQ9BVI4 516 aaKnown RBP15.1■□□□□ 0.01
FN1-226ENST00000496542 ALDH8A1Q9H2A2 487 aaPredicted RBP15.1■□□□□ 0.01
FN1-226ENST00000496542 COL20A1Q9P218 1284 aa15.1■□□□□ 0.01
FN1-226ENST00000496542 MRPL11Q9Y3B7 192 aaKnown RBP15.1■□□□□ 0.01
FN1-226ENST00000496542 KIAA1217Q5T5P2 1943 aa15.09■□□□□ 0.01
FN1-226ENST00000496542 DLL1O00548 723 aa15.09■□□□□ 0.01
FN1-226ENST00000496542 ARIH2O95376 493 aa15.09■□□□□ 0.01
FN1-226ENST00000496542 DNAJB2P25686 324 aa15.09■□□□□ 0.01
FN1-226ENST00000496542 CCL23P55773 120 aa15.09■□□□□ 0.01
FN1-226ENST00000496542 TTLL4Q14679 1199 aa15.09■□□□□ 0.01
FN1-226ENST00000496542 NSUN6Q8TEA1 469 aaKnown RBP15.09■□□□□ 0.01
FN1-226ENST00000496542 TAAR1Q96RJ0 339 aa15.09■□□□□ 0.01
FN1-226ENST00000496542 MTG1Q9BT17 334 aaPredicted RBP15.09■□□□□ 0.01
FN1-226ENST00000496542 IL23AQ9NPF7 189 aa15.09■□□□□ 0.01
FN1-226ENST00000496542 TRMT13Q9NUP7 481 aaKnown RBP15.09■□□□□ 0.01
FN1-226ENST00000496542 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
FN1-226ENST00000496542 EYSQ5T1H1 3165 aa15.08■□□□□ 0.01
FN1-226ENST00000496542 TMEM265A0A087WTH1 108 aa15.08■□□□□ 0
FN1-226ENST00000496542 KLRF2D3W0D1 207 aa15.08■□□□□ 0
FN1-226ENST00000496542 CYP21A2P08686 494 aa15.08■□□□□ 0
FN1-226ENST00000496542 EIF2AK2P19525 551 aaKnown RBP15.08■□□□□ 0
FN1-226ENST00000496542 FAM47CQ5HY64 1035 aa15.08■□□□□ 0
FN1-226ENST00000496542 SEPT14Q6ZU15 432 aa15.08■□□□□ 0
FN1-226ENST00000496542 RALYLQ86SE5 291 aaKnown RBP15.08■□□□□ 0
FN1-226ENST00000496542 PPP1R13LQ8WUF5 828 aa15.08■□□□□ 0
FN1-226ENST00000496542 RMDN3Q96TC7 470 aa15.08■□□□□ 0
FN1-226ENST00000496542 AMNQ9BXJ7 453 aa15.08■□□□□ 0
FN1-226ENST00000496542 WNT8AQ9H1J5 351 aa15.08■□□□□ 0
FN1-226ENST00000496542 MAD2L2Q9UI95 211 aa15.08■□□□□ 0
FN1-226ENST00000496542 TAF6LQ9Y6J9 622 aa15.08■□□□□ 0
FN1-226ENST00000496542 PRUNE2Q8WUY3 3088 aa15.08■□□□□ 0
FN1-226ENST00000496542 GRXCR1A8MXD5 290 aa15.07■□□□□ 0
FN1-226ENST00000496542 IFIT3O14879 490 aaKnown RBP15.07■□□□□ 0
FN1-226ENST00000496542 CFBP00751 764 aa15.07■□□□□ 0
FN1-226ENST00000496542 CYP2C9P11712 490 aa15.07■□□□□ 0
FN1-226ENST00000496542 FOSL2P15408 326 aa15.07■□□□□ 0
FN1-226ENST00000496542 CHMP4BP1P59074 171 aa15.07■□□□□ 0
FN1-226ENST00000496542 NBPF20Q3BBV1 942 aa15.07■□□□□ 0
FN1-226ENST00000496542 RASIP1Q5U651 963 aa15.07■□□□□ 0
FN1-226ENST00000496542 ARHGEF16Q5VV41 709 aa15.07■□□□□ 0
FN1-226ENST00000496542 MAFAQ8NHW3 353 aaPredicted RBP15.07■□□□□ 0
FN1-226ENST00000496542 TIFAQ96CG3 184 aa15.07■□□□□ 0
FN1-226ENST00000496542 SCLYQ96I15 445 aa15.07■□□□□ 0
FN1-226ENST00000496542 MAF1Q9H063 256 aa15.07■□□□□ 0
FN1-226ENST00000496542 TTC28Q96AY4 2481 aa15.07■□□□□ 0
FN1-226ENST00000496542 GBF1Q92538 1859 aa15.06■□□□□ 0
FN1-226ENST00000496542 SCN5AQ14524 2016 aa15.06■□□□□ 0
FN1-226ENST00000496542 ERICH2A1L162 156 aa15.06■□□□□ 0
FN1-226ENST00000496542 A6NJR5 290 aa15.06■□□□□ 0
FN1-226ENST00000496542 ZBTB5O15062 677 aa15.06■□□□□ 0
FN1-226ENST00000496542 SGSM2O43147 1006 aa15.06■□□□□ 0
FN1-226ENST00000496542 KPNA6O60684 536 aa15.06■□□□□ 0
FN1-226ENST00000496542 PPP1R11O60927 126 aaPredicted RBP15.06■□□□□ 0
FN1-226ENST00000496542 FGBP02675 491 aa15.06■□□□□ 0
FN1-226ENST00000496542 SUPT20HL2P0C7V6 817 aa15.06■□□□□ 0
FN1-226ENST00000496542 PBX2P40425 430 aa15.06■□□□□ 0
FN1-226ENST00000496542 GRM4Q14833 912 aa15.06■□□□□ 0
FN1-226ENST00000496542 STXBP2Q15833 593 aa15.06■□□□□ 0
FN1-226ENST00000496542 LY6KQ17RY6 165 aa15.06■□□□□ 0
FN1-226ENST00000496542 CHST3Q7LGC8 479 aa15.06■□□□□ 0
FN1-226ENST00000496542 OTOP2Q7RTS6 562 aa15.06■□□□□ 0
FN1-226ENST00000496542 HOMER1Q86YM7 354 aa15.06■□□□□ 0
FN1-226ENST00000496542 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.06■□□□□ 0
FN1-226ENST00000496542 AFG1LQ8WV93 481 aa15.06■□□□□ 0
FN1-226ENST00000496542 HERVK_113Q902F9 699 aa15.06■□□□□ 0
FN1-226ENST00000496542 IWS1Q96ST2 819 aa15.06■□□□□ 0
FN1-226ENST00000496542 MTIF3Q9H2K0 278 aaKnown RBP15.06■□□□□ 0
FN1-226ENST00000496542 SENP2Q9HC62 589 aa15.06■□□□□ 0
FN1-226ENST00000496542 CXXC1Q9P0U4 656 aaPredicted RBP15.06■□□□□ 0
FN1-226ENST00000496542 PCDHA1Q9Y5I3 950 aa15.06■□□□□ 0
FN1-226ENST00000496542 CHD9Q3L8U1 2897 aa15.05■□□□□ 0
FN1-226ENST00000496542 PALM3A6NDB9 673 aaPredicted RBP15.05■□□□□ -0
FN1-226ENST00000496542 E7EWF7 191 aa15.05■□□□□ -0
FN1-226ENST00000496542 OPLAHO14841 1288 aa15.05■□□□□ -0
FN1-226ENST00000496542 GH1P01241 217 aa15.05■□□□□ -0
FN1-226ENST00000496542 GRIN2CQ14957 1233 aa15.05■□□□□ -0
FN1-226ENST00000496542 WTAPQ15007 396 aa15.05■□□□□ -0
FN1-226ENST00000496542 SART3Q15020 963 aaKnown RBP15.05■□□□□ -0
FN1-226ENST00000496542 CCDC62Q6P9F0 684 aa15.05■□□□□ -0
FN1-226ENST00000496542 STOX1Q6ZVD7 989 aa15.05■□□□□ -0
FN1-226ENST00000496542 NCOA7Q8NI08 942 aa15.05■□□□□ -0
FN1-226ENST00000496542 MTMR8Q96EF0 704 aa15.05■□□□□ -0
FN1-226ENST00000496542 PBX4Q9BYU1 374 aa15.05■□□□□ -0
FN1-226ENST00000496542 ZNF576Q9H609 170 aa15.05■□□□□ -0
FN1-226ENST00000496542 PXMP2Q9NR77 195 aa15.05■□□□□ -0
FN1-226ENST00000496542 MYH7BA7E2Y1 1941 aa15.05■□□□□ -0
FN1-226ENST00000496542 TRIP12Q14669 1992 aaPredicted RBP15.04■□□□□ -0
FN1-226ENST00000496542 NR3C2P08235 984 aa15.04■□□□□ -0
FN1-226ENST00000496542 MMP3P08254 477 aa15.04■□□□□ -0
FN1-226ENST00000496542 HOXA13P31271 388 aaPredicted RBP15.04■□□□□ -0
FN1-226ENST00000496542 HSD17B4P51659 736 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms