RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 MRVI1Q9Y6F6 885 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 DYNC1LI2O43237 492 aaPredicted RBP9.69□□□□□ -0.86
VPS13B-206ENST00000496144 CCDC192P0DO97 292 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 SYN1P17600 705 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 CA8P35219 290 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 ELMSAN1Q6PJG2 1045 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 SLC44A5Q8NCS7 719 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 VTA1Q9NP79 307 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 LRFN2Q9ULH4 789 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 NAV1Q8NEY1 1877 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 AKNAD1Q5T1N1 836 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 SDF4Q9BRK5 362 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 SPDYE16A6NNV3 312 aaPredicted RBP9.69□□□□□ -0.86
VPS13B-206ENST00000496144 GSG1L2A8MUP6 293 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 GH1P01241 217 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 MCTP2Q6DN12 878 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 GMCL1P1Q8NEA9 526 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 NEDD1Q8NHV4 660 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 CDHR1Q96JP9 859 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 MTG1Q9BT17 334 aaPredicted RBP9.69□□□□□ -0.86
VPS13B-206ENST00000496144 TNMDQ9H2S6 317 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 RCOR1Q9UKL0 485 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 DDX60LQ5H9U9 1706 aaKnown RBP9.69□□□□□ -0.86
VPS13B-206ENST00000496144 KCTD1Q719H9 257 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 IGDCC4Q8TDY8 1250 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 GOLPH3LQ9H4A5 285 aa9.69□□□□□ -0.86
VPS13B-206ENST00000496144 PHF20L1A8MW92 1017 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 KDM4AO75164 1064 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 NR1I2O75469 434 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 IGFBP4P22692 258 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 SHMT1P34896 483 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 PLCD1P51178 756 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 ACVR2BQ13705 512 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 TATDN1Q6P1N9 297 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 SEPT14Q6ZU15 432 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 NSUN6Q8TEA1 469 aaKnown RBP9.68□□□□□ -0.86
VPS13B-206ENST00000496144 R3HDMLQ9H3Y0 253 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 FRMPD2Q68DX3 1309 aaPredicted RBP9.68□□□□□ -0.86
VPS13B-206ENST00000496144 CFBP00751 764 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 SRGAP2BP0DMP2 458 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 ANO1Q5XXA6 986 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 AMNQ9BXJ7 453 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 DACT1Q9NYF0 836 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 GOLGA6L4A6NEF3 574 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 CACNB2Q08289 660 aaPredicted RBP9.68□□□□□ -0.86
VPS13B-206ENST00000496144 CAMK4Q16566 473 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 IQSEC1Q6DN90 963 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 CKAP2LQ8IYA6 745 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.68□□□□□ -0.86
VPS13B-206ENST00000496144 B4E1Z4 1266 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 EFCAB14O75071 495 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 NDUFB10O96000 172 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 MSNP26038 577 aaKnown RBP9.68□□□□□ -0.86
VPS13B-206ENST00000496144 METAP2P50579 478 aaKnown RBP eCLIP9.68□□□□□ -0.86
VPS13B-206ENST00000496144 ADGRA1Q86SQ6 560 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 TDHQ8IZJ6 230 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 RBM28Q9NW13 759 aaKnown RBP9.68□□□□□ -0.86
VPS13B-206ENST00000496144 RTEL1Q9NZ71 1219 aa9.68□□□□□ -0.86
VPS13B-206ENST00000496144 VWA5AO00534 786 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 RPLP2P05387 115 aaKnown RBP9.67□□□□□ -0.86
VPS13B-206ENST00000496144 LTBP1Q14766 1721 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 STK36Q9NRP7 1315 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 TYRO3Q06418 890 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 EEPD1Q7L9B9 569 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 BRAPQ7Z569 592 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 SGMS1Q86VZ5 419 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 PIBF1Q8WXW3 757 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 ZNF500O60304 480 aaPredicted RBP9.67□□□□□ -0.86
VPS13B-206ENST00000496144 CDKL5O76039 1030 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 PARNO95453 639 aaKnown RBP9.67□□□□□ -0.86
VPS13B-206ENST00000496144 BICD2Q8TD16 824 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 ANAPC4Q9UJX5 808 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 FGBP02675 491 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 SNW1Q13573 536 aaKnown RBP9.67□□□□□ -0.86
VPS13B-206ENST00000496144 GRB14Q14449 540 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 SH3BP5LQ7L8J4 393 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 SCFD2Q8WU76 684 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 C8orf76Q96K31 380 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 USP28Q96RU2 1077 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 SENP2Q9HC62 589 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 SYNGAP1Q96PV0 1343 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 GUCY1B3Q02153 619 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 NCBP1Q09161 790 aaKnown RBP9.67□□□□□ -0.86
VPS13B-206ENST00000496144 SLC28A3Q9HAS3 691 aa9.67□□□□□ -0.86
VPS13B-206ENST00000496144 ADCY5O95622 1261 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 CDC27P30260 824 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 CCND3P30281 292 aaPredicted RBP9.66□□□□□ -0.86
VPS13B-206ENST00000496144 CEP95Q96GE4 821 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 ZSCAN10Q96SZ4 725 aaPredicted RBP9.66□□□□□ -0.86
VPS13B-206ENST00000496144 CDK5RAP2Q96SN8 1893 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 SAFBQ15424 915 aaKnown RBP eCLIP9.66□□□□□ -0.86
VPS13B-206ENST00000496144 APOA5Q6Q788 366 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 PPM1EQ8WY54 764 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 MTMR4Q9NYA4 1195 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 ORC3Q9UBD5 711 aaPredicted RBP9.66□□□□□ -0.86
VPS13B-206ENST00000496144 ZKSCAN5Q9Y2L8 839 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 SLC4A7Q9Y6M7 1214 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 LOC102724159A0A0B4J2E5 919 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 PWP2Q15269 919 aaKnown RBP9.66□□□□□ -0.86
VPS13B-206ENST00000496144 FAM160B1Q5W0V3 765 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms