RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 IDH1O75874 414 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 CYP2E1P05181 493 aaPredicted RBP11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 AVPR2P30518 371 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 ZXDAP98168 799 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 GABPAQ06546 454 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 DDX10Q13206 875 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 CCDC158Q5M9N0 1113 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 FAM83BQ5T0W9 1011 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 FOXD4L5Q5VV16 416 aaPredicted RBP11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 DGLUCYQ7Z3D6 616 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 RPAINQ86UA6 219 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 CCDC155Q8N6L0 562 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 FOXD4L4Q8WXT5 416 aaPredicted RBP11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 FGD4Q96M96 766 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 SLF1Q9BQI6 1058 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 PRKRIP1Q9H875 184 aaPredicted RBP11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 ALG13Q9NP73 1137 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 POLR3EQ9NVU0 708 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 FBXO40Q9UH90 709 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 RIPK3Q9Y572 518 aa11.6□□□□□ -0.55
SMARCAL1-213ENST00000496037 EPG5Q9HCE0 2579 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 CACNA1GO43497 2377 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 PATL2C9JE40 543 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 EFCAB14O75071 495 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 RGS20O76081 388 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 SMPD1P17405 629 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 NBL1P41271 181 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 SIGLEC14Q08ET2 396 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 SMAD4Q13485 552 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 COL19A1Q14993 1142 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 FAM117BQ6P1L5 589 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 CNKSR3Q6P9H4 555 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 CPXCR1Q8N123 301 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 NKD2Q969F2 451 aaPredicted RBP11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 CLUAP1Q96AJ1 413 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 FAM117AQ9C073 453 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 MCM9Q9NXL9 1143 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 SWAP70Q9UH65 585 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 Q9Y3F1 56 aa11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
SMARCAL1-213ENST00000496037 PTPRSQ13332 1948 aa11.58□□□□□ -0.55
SMARCAL1-213ENST00000496037 DMXL1Q9Y485 3027 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 ABHD14A-ACY1A0A1B0GW23 586 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 ASB14A6NK59 587 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 SRGAP3O43295 1099 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 PTGS1P23219 599 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 LSM11P83369 360 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 MCTP2Q6DN12 878 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 SIAH1Q8IUQ4 282 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 ADSSL1Q8N142 457 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 AFAP1L1Q8TED9 768 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 SAMD11Q96NU1 681 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 PIH1D3Q9NQM4 214 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 INSL6Q9Y581 213 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 MCM3APO60318 1980 aa11.58□□□□□ -0.56
SMARCAL1-213ENST00000496037 NAV1Q8NEY1 1877 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 KMT2BQ9UMN6 2715 aaPredicted RBP11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 ZBED4O75132 1171 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 MYL3P08590 195 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 AKR1B1P15121 316 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 ZAP70P43403 619 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 CPT1AP50416 773 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 GPM6BQ13491 265 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 EPC2Q52LR7 807 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 IQSEC1Q6DN90 963 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 CHST13Q8NET6 341 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 CAGE1Q8TC20 777 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 CNTNAP3BQ96NU0 1288 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 MTG1Q9BT17 334 aaPredicted RBP11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 CNTNAP3Q9BZ76 1288 aa11.57□□□□□ -0.56
SMARCAL1-213ENST00000496037 FAM186AA6NE01 2351 aa11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 USP17L12C9JPN9 530 aa11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 USP17L21D6R901 530 aa11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 H3BNC9 293 aa11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 ATP2A1O14983 1001 aa11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 PARNO95453 639 aaKnown RBP11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 EEF2P13639 858 aaKnown RBP11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 LTBRP36941 435 aa11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 PURAQ00577 322 aaKnown RBP11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 IKBKEQ14164 716 aa11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 BRDTQ58F21 947 aaPredicted RBP11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 RIF1Q5UIP0 2472 aaKnown RBP11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 NFRKBQ6P4R8 1299 aa11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 FBXO16Q8IX29 292 aaPredicted RBP11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 CD207Q9UJ71 328 aa11.56□□□□□ -0.56
SMARCAL1-213ENST00000496037 CFAP47Q6ZTR5 3102 aa11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 CNTN2Q02246 1040 aa11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 PTPN11Q06124 597 aaPredicted RBP11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 G3BP1Q13283 466 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 TMED8Q6PL24 325 aaPredicted RBP11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 LRRC8DQ7L1W4 858 aa11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 EEPD1Q7L9B9 569 aa11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 FAM133AQ8N9E0 248 aa11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 PRPF38AQ8NAV1 312 aaKnown RBP11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 CCDC17Q96LX7 622 aa11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 CRNKL1Q9BZJ0 848 aaKnown RBP11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 KANSL2Q9H9L4 492 aa11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 RAVER2Q9HCJ3 691 aaKnown RBP11.55□□□□□ -0.56
SMARCAL1-213ENST00000496037 PDGFCQ9NRA1 345 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms