RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 USP17L22D6RA61 530 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 USP17L17D6RBQ6 530 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 USP17L19D6RCP7 530 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 USP17L20D6RJB6 530 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 PIK3CDO00329 1044 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 MEIS2O14770 477 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 CCNT1O60563 726 aaKnown RBP12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 ICAM1P05362 532 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 DEKP35659 375 aaKnown RBP12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 GRIN1Q05586 938 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 USP17L24Q0WX57 530 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 LETM2Q2VYF4 491 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 USP17L6PQ6QN14 398 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 ANKRD13AQ8IZ07 590 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 ANO3Q9BYT9 981 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 TMOD4Q9NZQ9 345 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 KCNH3Q9ULD8 1083 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 CEP290O15078 2479 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 TRIOBPQ9H2D6 2365 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 VWA3AA6NCI4 1184 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 OPLAHO14841 1288 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 ZBED4O75132 1171 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 FLOT1O75955 427 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 GCFC2P16383 781 aaKnown RBP12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 LONP1P36776 959 aaKnown RBP12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 MRE11P49959 708 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 USP11P51784 963 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 HMGCS2P54868 508 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 SLC9C1Q4G0N8 1177 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 PPP4R3AQ6IN85 833 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 ELOA2Q8IYF1 753 aaPredicted RBP12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 PTPN18Q99952 460 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 SDF4Q9BRK5 362 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 FUCA2Q9BTY2 467 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 TMEM60Q9H2L4 133 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 SLC38A10Q9HBR0 1119 aa12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 CTDP1Q9Y5B0 961 aaPredicted RBP12.17□□□□□ -0.46
ECHDC3-204ENST00000495787 ZNF536O15090 1300 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 LOC285556D6RIA3 1793 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 SPDYE3A6NKU9 549 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 H0YGN5 161 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 GCOM1H8Y6P7 765 aaPredicted RBP12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 EDIL3O43854 480 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 NEMFO60524 1076 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 OR52Z1P0C646 297 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 POLR2MP0CAP2 368 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 CCDC192P0DO97 292 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 DSG3P32926 999 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 GJA5P36382 358 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 PPATQ06203 517 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 IL17AQ16552 155 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 SPECC1Q5M775 1068 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 MOXD1Q6UVY6 613 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 DTHD1Q6ZMT9 781 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 CATSPERGQ6ZRH7 1159 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 ERO1BQ86YB8 467 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 CKAP2LQ8IYA6 745 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 SAMD3Q8N6K7 520 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 PYM1Q9BRP8 204 aaKnown RBP12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 GRPEL1Q9HAV7 217 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 CCPG1Q9ULG6 757 aa12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 COL11A1P12107 1806 aaPredicted RBP12.16□□□□□ -0.46
ECHDC3-204ENST00000495787 MYPNQ86TC9 1320 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 VWA5AO00534 786 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 CXCL11O14625 94 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 TAL1P17542 331 aaPredicted RBP12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 CAP1Q01518 475 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 COG2Q14746 738 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 SASS6Q6UVJ0 657 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 KRBA2Q6ZNG9 492 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 USP49Q70CQ1 688 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 CRYGNQ8WXF5 182 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 SYMPKQ92797 1274 aaKnown RBP12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 OPTNQ96CV9 577 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 EPSTI1Q96J88 318 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 AGBL1Q96MI9 1066 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 MBOAT7Q96N66 472 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 RBSNQ9H1K0 784 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 ELP3Q9H9T3 547 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 USP25Q9UHP3 1055 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 ADAMTS5Q9UNA0 930 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 PTCH2Q9Y6C5 1203 aa12.15□□□□□ -0.46
ECHDC3-204ENST00000495787 CYP3A7-CYP3A51PA0A087WV96 503 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 POLR2DO15514 142 aaKnown RBP12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 TDP2O95551 362 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 CFBP00751 764 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 CYP3A4P08684 503 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 CYP3A7P24462 503 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 SREBF1P36956 1147 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 OAZ1P54368 228 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 ARHGAP4P98171 946 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 GHRHRQ02643 423 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 TYRO3Q06418 890 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 PPIL2Q13356 520 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 CALCRLQ16602 461 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 LONRF3Q496Y0 759 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 KANK3Q6NY19 840 aa12.14□□□□□ -0.47
ECHDC3-204ENST00000495787 POTEDQ86YR6 584 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms