RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 TXNP10599 105 aaKnown RBP8.39□□□□□ -1.07
VPS52-221ENST00000495755 FPGSQ05932 587 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 COL9A3Q14050 684 aaPredicted RBP8.39□□□□□ -1.07
VPS52-221ENST00000495755 SART3Q15020 963 aaKnown RBP8.39□□□□□ -1.07
VPS52-221ENST00000495755 NECTIN1Q15223 517 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 TMEM67Q5HYA8 995 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 FAM109BQ6ICB4 259 aaPredicted RBP8.39□□□□□ -1.07
VPS52-221ENST00000495755 MFSD5Q6N075 450 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 CCDC62Q6P9F0 684 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 Q7L0L9 218 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 CATIPQ7Z7H3 387 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 DEFB123Q8N688 67 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 PIGSQ96S52 555 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 RMDN3Q96TC7 470 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 MAP3K14Q99558 947 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 TRPV6Q9H1D0 765 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 LY9Q9HBG7 655 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 GPHNQ9NQX3 736 aaPredicted RBP8.39□□□□□ -1.07
VPS52-221ENST00000495755 MAP3K20Q9NYL2 800 aaKnown RBP8.39□□□□□ -1.07
VPS52-221ENST00000495755 PCDHA1Q9Y5I3 950 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 PRUNE2Q8WUY3 3088 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 PNMA6FA0A0J9YX94 578 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 TLR3O15455 904 aaKnown RBP8.38□□□□□ -1.07
VPS52-221ENST00000495755 PRC1O43663 620 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 EIF3JO75822 258 aaKnown RBP8.38□□□□□ -1.07
VPS52-221ENST00000495755 ARIH2O95376 493 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 CFBP00751 764 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 MCM5P33992 734 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 CPT1AP50416 773 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 PSMC6P62333 389 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 PURAQ00577 322 aaKnown RBP8.38□□□□□ -1.07
VPS52-221ENST00000495755 TRAF1Q13077 416 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 TTLL4Q14679 1199 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 PPP2R5BQ15173 497 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 STXBP2Q15833 593 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 CREB3L3Q68CJ9 461 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 C16orf59Q7L2K0 433 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 SAMD3Q8N6K7 520 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 OR6J1Q8NGC5 347 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 COPS5Q92905 334 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 PXMP2Q9NR77 195 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 POLR3EQ9NVU0 708 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 MTMR10Q9NXD2 777 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 UNC80Q8N2C7 3258 aa8.38□□□□□ -1.07
VPS52-221ENST00000495755 CHD7Q9P2D1 2997 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 SH2B2O14492 632 aaPredicted RBP8.37□□□□□ -1.07
VPS52-221ENST00000495755 B4GALT4O60513 344 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 KPNA6O60684 536 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 DDAH1O94760 285 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 NR3C2P08235 984 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 MYL3P08590 195 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 EIF2AK2P19525 551 aaKnown RBP8.37□□□□□ -1.07
VPS52-221ENST00000495755 SMARCA1P28370 1054 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 CYP2C18P33260 490 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 LIFRP42702 1097 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 SMAD3P84022 425 aaKnown RBP8.37□□□□□ -1.07
VPS52-221ENST00000495755 LY6KQ17RY6 165 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 BRDTQ58F21 947 aaPredicted RBP8.37□□□□□ -1.07
VPS52-221ENST00000495755 ARHGEF16Q5VV41 709 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 SEPT14Q6ZU15 432 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 VSIG10LQ86VR7 867 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 HOMER1Q86YM7 354 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 ZNF654Q8IZM8 581 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 TMTC2Q8N394 836 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 TMEM199Q8N511 208 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 TMEM87BQ96K49 555 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 PDCD2LQ9BRP1 358 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 MTG1Q9BT17 334 aaPredicted RBP8.37□□□□□ -1.07
VPS52-221ENST00000495755 NOC4LQ9BVI4 516 aaKnown RBP8.37□□□□□ -1.07
VPS52-221ENST00000495755 ALDH8A1Q9H2A2 487 aaPredicted RBP8.37□□□□□ -1.07
VPS52-221ENST00000495755 ANO2Q9NQ90 1003 aa8.37□□□□□ -1.07
VPS52-221ENST00000495755 DDX41Q9UJV9 622 aaKnown RBP8.37□□□□□ -1.07
VPS52-221ENST00000495755 UMODL1Q5DID0 1318 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 GCOM1H8Y6P7 765 aaPredicted RBP8.36□□□□□ -1.07
VPS52-221ENST00000495755 RGS20O76081 388 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 GH1P01241 217 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 POLR2MP0CAP2 368 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 CSF2RAP15509 400 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 HOXA13P31271 388 aaPredicted RBP8.36□□□□□ -1.07
VPS52-221ENST00000495755 KIF5BP33176 963 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 ARHGAP1Q07960 439 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 PPIGQ13427 754 aaKnown RBP eCLIP8.36□□□□□ -1.076e-7■□□□□ 10.3
VPS52-221ENST00000495755 NBPF20Q3BBV1 942 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 TMEM240Q5SV17 173 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 RASIP1Q5U651 963 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 CASC1Q6TDU7 716 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 CTCFLQ8NI51 663 aaPredicted RBP8.36□□□□□ -1.07
VPS52-221ENST00000495755 AFG1LQ8WV93 481 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 EMID1Q96A84 441 aaPredicted RBP8.36□□□□□ -1.07
VPS52-221ENST00000495755 RNPC3Q96LT9 517 aaKnown RBP8.36□□□□□ -1.07
VPS52-221ENST00000495755 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.36□□□□□ -1.071e-5■□□□□ 8.6
VPS52-221ENST00000495755 LZTS2Q9BRK4 669 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 MYL10Q9BUA6 226 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 SPZ1Q9BXG8 430 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 PPP1R12CQ9BZL4 782 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 HIPK3Q9H422 1215 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 TRMT13Q9NUP7 481 aaKnown RBP8.36□□□□□ -1.07
VPS52-221ENST00000495755 STXBP5LQ9Y2K9 1186 aa8.36□□□□□ -1.07
VPS52-221ENST00000495755 CDH23Q9H251 3354 aa8.35□□□□□ -1.07
VPS52-221ENST00000495755 TRANK1O15050 2925 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms