RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 EDNRBP24530 442 aa15.91■□□□□ 0.14
COL1A1-209ENST00000495677 WDR5P61964 334 aaKnown RBP15.91■□□□□ 0.14
COL1A1-209ENST00000495677 PPARAQ07869 468 aa15.91■□□□□ 0.14
COL1A1-209ENST00000495677 ALYREFQ86V81 257 aaKnown RBP15.91■□□□□ 0.14
COL1A1-209ENST00000495677 GJD3Q8N144 294 aa15.91■□□□□ 0.14
COL1A1-209ENST00000495677 CCDC155Q8N6L0 562 aa15.91■□□□□ 0.14
COL1A1-209ENST00000495677 DNERQ8NFT8 737 aa15.91■□□□□ 0.14
COL1A1-209ENST00000495677 SCFD2Q8WU76 684 aa15.91■□□□□ 0.14
COL1A1-209ENST00000495677 MPHOSPH6Q99547 160 aaKnown RBP15.91■□□□□ 0.14
COL1A1-209ENST00000495677 KCNH6Q9H252 994 aa15.91■□□□□ 0.14
COL1A1-209ENST00000495677 UBE2ZQ9H832 354 aaPredicted RBP15.91■□□□□ 0.14
COL1A1-209ENST00000495677 ISY1Q9ULR0 285 aaKnown RBP15.91■□□□□ 0.14
COL1A1-209ENST00000495677 STX8Q9UNK0 236 aa15.91■□□□□ 0.14
COL1A1-209ENST00000495677 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL1A1-209ENST00000495677 ABHD14A-ACY1A0A1B0GW23 586 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 FAM86C2PA6NEL3 165 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 M0R2C6 588 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 EFCAB14O75071 495 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 GJB5O95377 273 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 ALADP13716 330 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 SNAP25P60880 206 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 PPP2R5BQ15173 497 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 CNKSR3Q6P9H4 555 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 SPRED2Q7Z698 418 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.9■□□□□ 0.14
COL1A1-209ENST00000495677 DCAF4Q8WV16 495 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 TGS1Q96RS0 853 aaKnown RBP15.9■□□□□ 0.14
COL1A1-209ENST00000495677 CTAGE1Q96RT6 745 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 RAD9AQ99638 391 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 NAPBQ9H115 298 aa15.9■□□□□ 0.14
COL1A1-209ENST00000495677 LCHNA4D1U4 455 aa15.89■□□□□ 0.13
COL1A1-209ENST00000495677 TSPY2A6NKD2 308 aa15.89■□□□□ 0.13
COL1A1-209ENST00000495677 B4DLN1 442 aa15.89■□□□□ 0.13
COL1A1-209ENST00000495677 NFIBO00712 420 aa15.89■□□□□ 0.13
COL1A1-209ENST00000495677 MRPL12P52815 198 aaKnown RBP15.89■□□□□ 0.13
COL1A1-209ENST00000495677 PTGISQ16647 500 aa15.89■□□□□ 0.13
COL1A1-209ENST00000495677 CLEC4DQ8WXI8 215 aa15.89■□□□□ 0.13
COL1A1-209ENST00000495677 MAF1Q9H063 256 aa15.89■□□□□ 0.13
COL1A1-209ENST00000495677 NOD1Q9Y239 953 aa15.89■□□□□ 0.13
COL1A1-209ENST00000495677 ZNF318Q5VUA4 2279 aa15.88■□□□□ 0.13
COL1A1-209ENST00000495677 SMARCA5O60264 1052 aaPredicted RBP15.88■□□□□ 0.13
COL1A1-209ENST00000495677 SELPP16109 830 aa15.88■□□□□ 0.13
COL1A1-209ENST00000495677 PUS10Q3MIT2 529 aaKnown RBP15.88■□□□□ 0.13
COL1A1-209ENST00000495677 RNF207Q6ZRF8 634 aa15.88■□□□□ 0.13
COL1A1-209ENST00000495677 GPATCH3Q96I76 525 aa15.88■□□□□ 0.13
COL1A1-209ENST00000495677 ZBED2Q9BTP6 218 aa15.88■□□□□ 0.13
COL1A1-209ENST00000495677 RALGAPA2Q2PPJ7 1873 aa15.88■□□□□ 0.13
COL1A1-209ENST00000495677 POTEB3A0JP26 581 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 PTPDC1A2A3K4 754 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 LINC01553A4QN01 128 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 FGRP09769 529 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 TXNP10599 105 aaKnown RBP15.87■□□□□ 0.13
COL1A1-209ENST00000495677 PDE4DQ08499 809 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 CCDC62Q6P9F0 684 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 POTEBQ6S5H4 581 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 LRRC8DQ7L1W4 858 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 RGS22Q8NE09 1264 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 GDPD5Q8WTR4 605 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 COPS5Q92905 334 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 ANAPC4Q9UJX5 808 aa15.87■□□□□ 0.13
COL1A1-209ENST00000495677 GRXCR2A6NFK2 248 aa15.86■□□□□ 0.13
COL1A1-209ENST00000495677 NBNO60934 754 aa15.86■□□□□ 0.13
COL1A1-209ENST00000495677 RPS6P62753 249 aaKnown RBP15.86■□□□□ 0.13
COL1A1-209ENST00000495677 DEFB103AP81534 67 aa15.86■□□□□ 0.13
COL1A1-209ENST00000495677 SYDE2Q5VT97 1194 aa15.86■□□□□ 0.13
COL1A1-209ENST00000495677 TTBK2Q6IQ55 1244 aa15.86■□□□□ 0.13
COL1A1-209ENST00000495677 GDF6Q6KF10 455 aaPredicted RBP15.86■□□□□ 0.13
COL1A1-209ENST00000495677 SLC30A10Q6XR72 485 aa15.86■□□□□ 0.13
COL1A1-209ENST00000495677 NEK9Q8TD19 979 aa15.86■□□□□ 0.13
COL1A1-209ENST00000495677 CTNNA3Q9UI47 895 aa15.86■□□□□ 0.13
COL1A1-209ENST00000495677 WDR19Q8NEZ3 1342 aa15.86■□□□□ 0.13
COL1A1-209ENST00000495677 MYO7AQ13402 2215 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 ORC4O43929 436 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 NMT2O60551 498 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 CKBP12277 381 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 SLC16A2P36021 539 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 HNRNPUQ00839 825 aaKnown RBP eCLIP15.85■□□□□ 0.13
COL1A1-209ENST00000495677 IKBKEQ14164 716 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 ZMYM1Q5SVZ6 1142 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 PPP1R13LQ8WUF5 828 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 DHX38Q92620 1227 aaKnown RBP15.85■□□□□ 0.13
COL1A1-209ENST00000495677 KAT2BQ92831 832 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 CHMP4CQ96CF2 233 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 SEC62Q99442 399 aaKnown RBP15.85■□□□□ 0.13
COL1A1-209ENST00000495677 DCTPP1Q9H773 170 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 TCP11L1Q9NUJ3 509 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 INSL6Q9Y581 213 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 ATG2AQ2TAZ0 1938 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 KAT6AQ92794 2004 aa15.85■□□□□ 0.13
COL1A1-209ENST00000495677 ARIH2O95376 493 aa15.84■□□□□ 0.13
COL1A1-209ENST00000495677 MMP3P08254 477 aa15.84■□□□□ 0.13
COL1A1-209ENST00000495677 IL9P15248 144 aa15.84■□□□□ 0.13
COL1A1-209ENST00000495677 CASTP20810 708 aaKnown RBP15.84■□□□□ 0.13
COL1A1-209ENST00000495677 KCNA5P22460 613 aa15.84■□□□□ 0.13
COL1A1-209ENST00000495677 CALML3P27482 149 aa15.84■□□□□ 0.13
COL1A1-209ENST00000495677 MRE11P49959 708 aa15.84■□□□□ 0.13
COL1A1-209ENST00000495677 CCDC96Q2M329 555 aa15.84■□□□□ 0.13
COL1A1-209ENST00000495677 PTCRAQ6ISU1 281 aaPredicted RBP15.84■□□□□ 0.13
COL1A1-209ENST00000495677 RASGRP2Q7LDG7 609 aa15.84■□□□□ 0.13
COL1A1-209ENST00000495677 TMCO2Q7Z6W1 182 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms