RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 VWA3AA6NCI4 1184 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 NDUFB10O96000 172 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 VCAM1P19320 739 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 AP3B2Q13367 1082 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 CDC37Q16543 378 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-214ENST00000495485 FAM110CQ1W6H9 321 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 INF2Q27J81 1249 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 ANO6Q4KMQ2 910 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 CATSPERGQ6ZRH7 1159 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 CLEC10AQ8IUN9 316 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 FAM43AQ8N2R8 423 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 TRIML1Q8N9V2 468 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 IQUBQ8NA54 791 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 ACER1Q8TDN7 264 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 SMCR8Q8TEV9 937 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-214ENST00000495485 COA7Q96BR5 231 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 SHISA4Q96DD7 197 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 ERO1AQ96HE7 468 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 GTPBP4Q9BZE4 634 aaKnown RBP11.61□□□□□ -0.55
HDAC3-214ENST00000495485 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-214ENST00000495485 FEM1BQ9UK73 627 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 MRVI1Q9Y6F6 885 aa11.61□□□□□ -0.55
HDAC3-214ENST00000495485 MGAMO43451 1857 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 A0A1W2PRG0 241 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 GOLGA6L6A8MZA4 724 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 POLR2DO15514 142 aaKnown RBP11.6□□□□□ -0.55
HDAC3-214ENST00000495485 NEMFO60524 1076 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 CCNT1O60563 726 aaKnown RBP11.6□□□□□ -0.55
HDAC3-214ENST00000495485 FKTNO75072 461 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 COPB2P35606 906 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 SLC16A2P36021 539 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 NLRP12P59046 1061 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 CCNA1P78396 465 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 SEMA3FQ13275 785 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 CRHR2Q13324 411 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 COG2Q14746 738 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 KIF22Q14807 665 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 SLC35G1Q2M3R5 365 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 QRICH1Q2TAL8 776 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 LETM2Q2VYF4 491 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 HS1BP3Q53T59 392 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 EARS2Q5JPH6 523 aaKnown RBP11.6□□□□□ -0.55
HDAC3-214ENST00000495485 CT47A1Q5JQC4 288 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-214ENST00000495485 TTBK2Q6IQ55 1244 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 SIAH1Q8IUQ4 282 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 TBCKQ8TEA7 893 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 ASCC2Q9H1I8 757 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-214ENST00000495485 CPVLQ9H3G5 476 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 CUEDC2Q9H467 287 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 MAGEF1Q9HAY2 307 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 BIN2Q9UBW5 565 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-214ENST00000495485 STK24Q9Y6E0 443 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 DOCK3Q8IZD9 2030 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 RLFQ13129 1914 aa11.6□□□□□ -0.55
HDAC3-214ENST00000495485 FAM205CA6NFA0 338 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 GPR25O00155 361 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 MARCH6O60337 910 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 MYL1P05976 194 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 TPM3P06753 285 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 OR52Z1P0C646 297 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 SLFN14P0C7P3 912 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 HSPA8P11142 646 aaKnown RBP11.59□□□□□ -0.55
HDAC3-214ENST00000495485 UBA7P41226 1012 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 USP11P51784 963 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 PRMT2P55345 433 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 SP3Q02447 781 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 POSTNQ15063 836 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 PKN2Q16513 984 aaKnown RBP11.59□□□□□ -0.55
HDAC3-214ENST00000495485 JAKMIP3Q5VZ66 844 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 PPP4R3AQ6IN85 833 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 C17orf99Q6UX52 265 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 SAMD3Q8N6K7 520 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 PRPF38AQ8NAV1 312 aaKnown RBP11.59□□□□□ -0.55
HDAC3-214ENST00000495485 RASSF8Q8NHQ8 419 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 SMARCE1Q969G3 411 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 CCDC47Q96A33 483 aaKnown RBP11.59□□□□□ -0.55
HDAC3-214ENST00000495485 BPIFA3Q9BQP9 254 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 PANK2Q9BZ23 570 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 MORF4L1Q9UBU8 362 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 MRPL11Q9Y3B7 192 aaKnown RBP11.59□□□□□ -0.55
HDAC3-214ENST00000495485 RABGAP1Q9Y3P9 1069 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 CTDP1Q9Y5B0 961 aaPredicted RBP11.59□□□□□ -0.55
HDAC3-214ENST00000495485 ADGRA2Q96PE1 1338 aa11.59□□□□□ -0.55
HDAC3-214ENST00000495485 SPDYE3A6NKU9 549 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 FOXN1O15353 648 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 SLC26A4O43511 780 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 PTMAP06454 111 aaKnown RBP11.58□□□□□ -0.56
HDAC3-214ENST00000495485 BCRP11274 1271 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 HOXD10P28358 340 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 OAZ1P54368 228 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 HERVK_113P62684 666 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 SHROOM1Q2M3G4 852 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-214ENST00000495485 TREML2Q5T2D2 321 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 MOXD1Q6UVY6 613 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-214ENST00000495485 RASGRP4Q8TDF6 673 aa11.58□□□□□ -0.56
HDAC3-214ENST00000495485 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
HDAC3-214ENST00000495485 TANGO6Q9C0B7 1094 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms