RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 FLCNQ8NFG4 579 aa10.87□□□□□ -0.67
GARNL3-219ENST00000495172 APOL5Q9BWW9 433 aa10.87□□□□□ -0.67
GARNL3-219ENST00000495172 PHF7Q9BWX1 381 aaPredicted RBP10.87□□□□□ -0.67
GARNL3-219ENST00000495172 OSBPL7Q9BZF2 842 aa10.87□□□□□ -0.67
GARNL3-219ENST00000495172 VCPKMTQ9H867 229 aa10.87□□□□□ -0.67
GARNL3-219ENST00000495172 RAVER2Q9HCJ3 691 aaKnown RBP10.87□□□□□ -0.67
GARNL3-219ENST00000495172 HOMER2Q9NSB8 354 aa10.87□□□□□ -0.67
GARNL3-219ENST00000495172 DSPP15924 2871 aaKnown RBP10.87□□□□□ -0.67
GARNL3-219ENST00000495172 WDR46O15213 610 aaKnown RBP10.86□□□□□ -0.67
GARNL3-219ENST00000495172 CIAO1O76071 339 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 AKR1B1P15121 316 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 PLCG2P16885 1265 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 DNAJB1P25685 340 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 CTNNB1P35222 781 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 BFSP2Q13515 415 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 CAMK1Q14012 370 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 CWF19L1Q69YN2 538 aaKnown RBP10.86□□□□□ -0.67
GARNL3-219ENST00000495172 RIN2Q8WYP3 895 aaPredicted RBP10.86□□□□□ -0.67
GARNL3-219ENST00000495172 WNT8BQ93098 351 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 EHD4Q9H223 541 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 NOD1Q9Y239 953 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 TMX2Q9Y320 296 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 LOC400499M0QZD8 3231 aa10.86□□□□□ -0.67
GARNL3-219ENST00000495172 ABHD14A-ACY1A0A1B0GW23 586 aa10.85□□□□□ -0.67
GARNL3-219ENST00000495172 CXCL10P02778 98 aa10.85□□□□□ -0.67
GARNL3-219ENST00000495172 ADRB1P08588 477 aa10.85□□□□□ -0.67
GARNL3-219ENST00000495172 IL15P40933 162 aaPredicted RBP10.85□□□□□ -0.67
GARNL3-219ENST00000495172 IKBKEQ14164 716 aa10.85□□□□□ -0.67
GARNL3-219ENST00000495172 PTGISQ16647 500 aa10.85□□□□□ -0.67
GARNL3-219ENST00000495172 GDF6Q6KF10 455 aaPredicted RBP10.85□□□□□ -0.67
GARNL3-219ENST00000495172 MAGEB6Q8N7X4 407 aa10.85□□□□□ -0.67
GARNL3-219ENST00000495172 DYNLL2Q96FJ2 89 aa10.85□□□□□ -0.67
GARNL3-219ENST00000495172 YME1L1Q96TA2 773 aa10.85□□□□□ -0.67
GARNL3-219ENST00000495172 TEX13BQ9BXU2 312 aa10.85□□□□□ -0.67
GARNL3-219ENST00000495172 PIH1D3Q9NQM4 214 aaKnown RBP10.85□□□□□ -0.67
GARNL3-219ENST00000495172 IGF2RP11717 2491 aa10.85□□□□□ -0.67
GARNL3-219ENST00000495172 LCTP09848 1927 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 NCK2O43639 380 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 ASGR2P07307 311 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 LINC00271P0C7V0 271 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 SELPP16109 830 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 CYP7A1P22680 504 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 ICA1Q05084 483 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 GABPAQ06546 454 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 MVPQ14764 893 aaKnown RBP10.84□□□□□ -0.67
GARNL3-219ENST00000495172 KIAA0319Q5VV43 1072 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 TRAF7Q6Q0C0 670 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 KIAA1211Q6ZU35 1233 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 MTG1Q9BT17 334 aaPredicted RBP10.84□□□□□ -0.67
GARNL3-219ENST00000495172 MFSD1Q9H3U5 465 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 TSHZ2Q9NRE2 1034 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 MYH8P13535 1937 aa10.84□□□□□ -0.67
GARNL3-219ENST00000495172 CYP2E1P05181 493 aaPredicted RBP10.83□□□□□ -0.68
GARNL3-219ENST00000495172 CKBP12277 381 aa10.83□□□□□ -0.68
GARNL3-219ENST00000495172 NRIP1P48552 1158 aa10.83□□□□□ -0.68
GARNL3-219ENST00000495172 COASYQ13057 564 aa10.83□□□□□ -0.68
GARNL3-219ENST00000495172 WWC1Q8IX03 1113 aa10.83□□□□□ -0.68
GARNL3-219ENST00000495172 DBF4BQ8NFT6 615 aa10.83□□□□□ -0.68
GARNL3-219ENST00000495172 VN1R2Q8NFZ6 395 aa10.83□□□□□ -0.68
GARNL3-219ENST00000495172 AFAP1L1Q8TED9 768 aa10.83□□□□□ -0.68
GARNL3-219ENST00000495172 COPS5Q92905 334 aa10.83□□□□□ -0.68
GARNL3-219ENST00000495172 SEZ6LQ9BYH1 1024 aa10.83□□□□□ -0.68
GARNL3-219ENST00000495172 IL16Q14005 1332 aa10.83□□□□□ -0.68
GARNL3-219ENST00000495172 EEF2P13639 858 aaKnown RBP10.82□□□□□ -0.68
GARNL3-219ENST00000495172 ARID4AP29374 1257 aaPredicted RBP10.82□□□□□ -0.68
GARNL3-219ENST00000495172 FXR2P51116 673 aaKnown RBP eCLIP10.82□□□□□ -0.68
GARNL3-219ENST00000495172 LRRFIP1Q32MZ4 808 aaKnown RBP10.82□□□□□ -0.68
GARNL3-219ENST00000495172 GORABQ5T7V8 394 aa10.82□□□□□ -0.68
GARNL3-219ENST00000495172 CCDC105Q8IYK2 499 aa10.82□□□□□ -0.68
GARNL3-219ENST00000495172 DTWD2Q8NBA8 298 aa10.82□□□□□ -0.68
GARNL3-219ENST00000495172 RUBCNQ92622 972 aa10.82□□□□□ -0.68
GARNL3-219ENST00000495172 SAMD11Q96NU1 681 aa10.82□□□□□ -0.68
GARNL3-219ENST00000495172 ARHGEF10LQ9HCE6 1279 aa10.82□□□□□ -0.68
GARNL3-219ENST00000495172 POLR3EQ9NVU0 708 aa10.82□□□□□ -0.68
GARNL3-219ENST00000495172 ITPR1Q14643 2758 aa10.82□□□□□ -0.68
GARNL3-219ENST00000495172 PER2O15055 1255 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 AMHP03971 560 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 POLR3DP05423 398 aaPredicted RBP10.81□□□□□ -0.68
GARNL3-219ENST00000495172 NPR3P17342 541 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 COPB2P35606 906 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 ZNF618Q5T7W0 954 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 NFRKBQ6P4R8 1299 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 TMEM179Q6ZVK1 233 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 TTC6Q86TZ1 520 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 OR6J1Q8NGC5 347 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 SUSD6Q92537 303 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 HAUS7Q99871 368 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 SLF1Q9BQI6 1058 aa10.81□□□□□ -0.68
GARNL3-219ENST00000495172 SALL2Q9Y467 1007 aaPredicted RBP10.81□□□□□ -0.68
GARNL3-219ENST00000495172 HELZ2Q9BYK8 2649 aaKnown RBP10.8□□□□□ -0.68
GARNL3-219ENST00000495172 KIAA1671Q9BY89 1806 aa10.8□□□□□ -0.68
GARNL3-219ENST00000495172 CLCN5P51795 746 aa10.8□□□□□ -0.68
GARNL3-219ENST00000495172 ZNF200P98182 395 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-219ENST00000495172 RALBP1Q15311 655 aa10.8□□□□□ -0.68
GARNL3-219ENST00000495172 IQSEC1Q6DN90 963 aa10.8□□□□□ -0.68
GARNL3-219ENST00000495172 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
GARNL3-219ENST00000495172 EFHBQ8N7U6 833 aa10.8□□□□□ -0.68
GARNL3-219ENST00000495172 CHMP4CQ96CF2 233 aa10.8□□□□□ -0.68
GARNL3-219ENST00000495172 A1CFQ9NQ94 594 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms