RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 CTDP1Q9Y5B0 961 aaPredicted RBP17.59■□□□□ 0.41
CHMP2B-205ENST00000494980 ASPMQ8IZT6 3477 aa17.59■□□□□ 0.41
CHMP2B-205ENST00000494980 BAZ2AQ9UIF9 1905 aaKnown RBP17.59■□□□□ 0.41
CHMP2B-205ENST00000494980 RRP1P56182 461 aaKnown RBP17.58■□□□□ 0.4
CHMP2B-205ENST00000494980 PTPN11Q06124 597 aaPredicted RBP17.58■□□□□ 0.4
CHMP2B-205ENST00000494980 DUSP28Q4G0W2 176 aa17.58■□□□□ 0.4
CHMP2B-205ENST00000494980 KIAA1211Q6ZU35 1233 aa17.58■□□□□ 0.4
CHMP2B-205ENST00000494980 SMRP1Q8NCR6 262 aa17.58■□□□□ 0.4
CHMP2B-205ENST00000494980 CTAGE1Q96RT6 745 aa17.58■□□□□ 0.4
CHMP2B-205ENST00000494980 DLL3Q9NYJ7 618 aa17.58■□□□□ 0.4
CHMP2B-205ENST00000494980 SWAP70Q9UH65 585 aa17.58■□□□□ 0.4
CHMP2B-205ENST00000494980 MYO10Q9HD67 2058 aa17.58■□□□□ 0.4
CHMP2B-205ENST00000494980 E9PSI1 815 aa17.57■□□□□ 0.4
CHMP2B-205ENST00000494980 IGSF3O75054 1194 aa17.57■□□□□ 0.4
CHMP2B-205ENST00000494980 ZBED4O75132 1171 aa17.57■□□□□ 0.4
CHMP2B-205ENST00000494980 PARNO95453 639 aaKnown RBP17.57■□□□□ 0.4
CHMP2B-205ENST00000494980 AMHP03971 560 aa17.57■□□□□ 0.4
CHMP2B-205ENST00000494980 CHMP4BP1P59074 171 aa17.57■□□□□ 0.4
CHMP2B-205ENST00000494980 DHX38Q92620 1227 aaKnown RBP17.57■□□□□ 0.4
CHMP2B-205ENST00000494980 YME1L1Q96TA2 773 aa17.57■□□□□ 0.4
CHMP2B-205ENST00000494980 USP17L12C9JPN9 530 aa17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 USP17L21D6R901 530 aa17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 SRGAP3O43295 1099 aa17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 ADAM15Q13444 863 aa17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 ACAP1Q15027 740 aa17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 PRPF38AQ8NAV1 312 aaKnown RBP17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 KCNG4Q8TDN1 519 aa17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 PHF7Q9BWX1 381 aaPredicted RBP17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 VTA1Q9NP79 307 aa17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 A1CFQ9NQ94 594 aaKnown RBP17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 COG6Q9Y2V7 657 aa17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 USP15Q9Y4E8 981 aaPredicted RBP17.56■□□□□ 0.4
CHMP2B-205ENST00000494980 GRM6O15303 877 aa17.55■□□□□ 0.4
CHMP2B-205ENST00000494980 CTNNB1P35222 781 aa17.55■□□□□ 0.4
CHMP2B-205ENST00000494980 CCDC158Q5M9N0 1113 aa17.55■□□□□ 0.4
CHMP2B-205ENST00000494980 ZBTB33Q86T24 672 aa17.55■□□□□ 0.4
CHMP2B-205ENST00000494980 OR6J1Q8NGC5 347 aa17.55■□□□□ 0.4
CHMP2B-205ENST00000494980 KIFC2Q96AC6 838 aa17.55■□□□□ 0.4
CHMP2B-205ENST00000494980 RIOK1Q9BRS2 568 aaKnown RBP17.55■□□□□ 0.4
CHMP2B-205ENST00000494980 ACAD9Q9H845 621 aa17.55■□□□□ 0.4
CHMP2B-205ENST00000494980 SLC38A10Q9HBR0 1119 aa17.55■□□□□ 0.4
CHMP2B-205ENST00000494980 CLEC1BQ9P126 229 aa17.55■□□□□ 0.4
CHMP2B-205ENST00000494980 CKBP12277 381 aa17.54■□□□□ 0.4
CHMP2B-205ENST00000494980 DBNDD2Q9BQY9 259 aa17.54■□□□□ 0.4
CHMP2B-205ENST00000494980 LMAN2LQ9H0V9 348 aa17.54■□□□□ 0.4
CHMP2B-205ENST00000494980 PCDHGC5Q9Y5F6 944 aa17.54■□□□□ 0.4
CHMP2B-205ENST00000494980 FLNBO75369 2602 aaKnown RBP17.54■□□□□ 0.4
CHMP2B-205ENST00000494980 MYH4Q9Y623 1939 aa17.54■□□□□ 0.4
CHMP2B-205ENST00000494980 GREB1LQ9C091 1923 aaPredicted RBP17.53■□□□□ 0.4
CHMP2B-205ENST00000494980 RBL2Q08999 1139 aa17.53■□□□□ 0.4
CHMP2B-205ENST00000494980 COASYQ13057 564 aa17.53■□□□□ 0.4
CHMP2B-205ENST00000494980 BRDTQ58F21 947 aaPredicted RBP17.53■□□□□ 0.4
CHMP2B-205ENST00000494980 GDF6Q6KF10 455 aaPredicted RBP17.53■□□□□ 0.4
CHMP2B-205ENST00000494980 WDR11Q9BZH6 1224 aa17.53■□□□□ 0.4
CHMP2B-205ENST00000494980 PRKRIP1Q9H875 184 aaPredicted RBP17.53■□□□□ 0.4
CHMP2B-205ENST00000494980 KANSL2Q9H9L4 492 aa17.53■□□□□ 0.4
CHMP2B-205ENST00000494980 CEP295Q9C0D2 2601 aa17.52■□□□□ 0.4
CHMP2B-205ENST00000494980 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.4
CHMP2B-205ENST00000494980 MBTPS1Q14703 1052 aa17.52■□□□□ 0.4
CHMP2B-205ENST00000494980 ASTLQ6HA08 431 aaPredicted RBP17.52■□□□□ 0.4
CHMP2B-205ENST00000494980 CCDC17Q96LX7 622 aa17.52■□□□□ 0.4
CHMP2B-205ENST00000494980 C11orf84Q9BUA3 381 aaPredicted RBP17.52■□□□□ 0.4
CHMP2B-205ENST00000494980 CRNKL1Q9BZJ0 848 aaKnown RBP17.52■□□□□ 0.4
CHMP2B-205ENST00000494980 ZZEF1O43149 2961 aa17.51■□□□□ 0.39
CHMP2B-205ENST00000494980 LGR5O75473 907 aa17.51■□□□□ 0.39
CHMP2B-205ENST00000494980 UPP2O95045 317 aa17.51■□□□□ 0.39
CHMP2B-205ENST00000494980 LMNAP02545 664 aaKnown RBP17.51■□□□□ 0.39
CHMP2B-205ENST00000494980 OAZ1P54368 228 aa17.51■□□□□ 0.39
CHMP2B-205ENST00000494980 SDR42E1Q8WUS8 393 aa17.51■□□□□ 0.39
CHMP2B-205ENST00000494980 HINFPQ9BQA5 517 aa17.51■□□□□ 0.39
CHMP2B-205ENST00000494980 RNF146Q9NTX7 359 aa17.51■□□□□ 0.39
CHMP2B-205ENST00000494980 HDAC5Q9UQL6 1122 aa17.51■□□□□ 0.39
CHMP2B-205ENST00000494980 FRYQ5TBA9 3013 aa17.5■□□□□ 0.39
CHMP2B-205ENST00000494980 RAD50Q92878 1312 aa17.5■□□□□ 0.39
CHMP2B-205ENST00000494980 MAGEB6P1A0A0J9YX57 407 aa17.5■□□□□ 0.39
CHMP2B-205ENST00000494980 KPNA6O60684 536 aa17.5■□□□□ 0.39
CHMP2B-205ENST00000494980 NDUFB10O96000 172 aa17.5■□□□□ 0.39
CHMP2B-205ENST00000494980 RSPO4Q2I0M5 234 aaPredicted RBP17.5■□□□□ 0.39
CHMP2B-205ENST00000494980 TRAF7Q6Q0C0 670 aa17.5■□□□□ 0.39
CHMP2B-205ENST00000494980 DCP1AQ9NPI6 582 aaPredicted RBP17.5■□□□□ 0.39
CHMP2B-205ENST00000494980 BARX2Q9UMQ3 279 aaPredicted RBP17.5■□□□□ 0.39
CHMP2B-205ENST00000494980 GCN1Q92616 2671 aaKnown RBP17.5■□□□□ 0.39
CHMP2B-205ENST00000494980 C5orf67F2Z3F1 127 aa17.49■□□□□ 0.39
CHMP2B-205ENST00000494980 CDK8P49336 464 aa17.49■□□□□ 0.39
CHMP2B-205ENST00000494980 KREMEN2Q8NCW0 462 aa17.49■□□□□ 0.39
CHMP2B-205ENST00000494980 DBF4BQ8NFT6 615 aa17.49■□□□□ 0.39
CHMP2B-205ENST00000494980 ZNF512BQ96KM6 892 aaPredicted RBP17.49■□□□□ 0.39
CHMP2B-205ENST00000494980 MEIS3Q99687 375 aa17.49■□□□□ 0.39
CHMP2B-205ENST00000494980 A6NJR5 290 aa17.48■□□□□ 0.39
CHMP2B-205ENST00000494980 F5H6K3 240 aa17.48■□□□□ 0.39
CHMP2B-205ENST00000494980 MMP1P03956 469 aa17.48■□□□□ 0.39
CHMP2B-205ENST00000494980 HOXB3P14651 431 aaPredicted RBP17.48■□□□□ 0.39
CHMP2B-205ENST00000494980 KLRC3Q07444 240 aa17.48■□□□□ 0.39
CHMP2B-205ENST00000494980 TNNI3KQ59H18 835 aa17.48■□□□□ 0.39
CHMP2B-205ENST00000494980 ZNF618Q5T7W0 954 aa17.48■□□□□ 0.39
CHMP2B-205ENST00000494980 EFHBQ8N7U6 833 aa17.48■□□□□ 0.39
CHMP2B-205ENST00000494980 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
CHMP2B-205ENST00000494980 PURBQ96QR8 312 aaKnown RBP17.48■□□□□ 0.39
CHMP2B-205ENST00000494980 FPGT-TNNI3KV9GXZ4 949 aa17.48■□□□□ 0.39
CHMP2B-205ENST00000494980 GLP2RO95838 553 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms