RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 C3P01024 1663 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 DEXIO95424 95 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 PENKP01210 267 aaPredicted RBP6.68□□□□□ -1.34
PHC3-214ENST00000494943 PHBP35232 272 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 MSH2P43246 934 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 CNNM4Q6P4Q7 775 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 BICDL1Q6ZP65 573 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 KLHL7Q8IXQ5 586 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 TRMT44Q8IYL2 757 aaKnown RBP6.68□□□□□ -1.34
PHC3-214ENST00000494943 UBL4BQ8N7F7 174 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 STKLD1Q8NE28 680 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 SH3TC2Q8TF17 1288 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 CALML4Q96GE6 196 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 NHEJ1Q9H9Q4 299 aaPredicted RBP6.68□□□□□ -1.34
PHC3-214ENST00000494943 DBF4Q9UBU7 674 aaPredicted RBP6.68□□□□□ -1.34
PHC3-214ENST00000494943 C2CD2Q9Y426 696 aa6.68□□□□□ -1.34
PHC3-214ENST00000494943 ENC1O14682 589 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 ZNF189O75820 626 aaPredicted RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 CALM1P0DP23 149 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 CALM2P0DP24 149 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 CALM3P0DP25 149 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 MAN1A1P33908 653 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 IL13P35225 146 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 MLH1P40692 756 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 KIF23Q02241 960 aaPredicted RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 INF2Q27J81 1249 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 SFMBT2Q5VUG0 894 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 TMEM132EQ6IEE7 984 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 SPATA4Q8NEY3 305 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 ELAC2Q9BQ52 826 aaKnown RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 CCDC8Q9H0W5 538 aaPredicted RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 GNA14O95837 355 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 ATP1A1P05023 1023 aaKnown RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 SGSM1Q2NKQ1 1148 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 KRT40Q6A162 431 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 ZNF554Q86TJ5 538 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 NOA1Q8NC60 698 aaKnown RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 RAB3IL1Q8TBN0 382 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 PRAM1Q96QH2 718 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 STRN4Q9NRL3 753 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 TCP11L1Q9NUJ3 509 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 AIPL1Q9NZN9 384 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 PCDHA13Q9Y5I0 950 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 SCINQ9Y6U3 715 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 PNMA6EA0A0J9YXQ4 647 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 KRIT1O00522 736 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 FOXP2O15409 715 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 TRAPPC3O43617 180 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 ZMYND10O75800 440 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 KRT13P13646 458 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 ATP6V1C1P21283 382 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 FNTAP49354 379 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 FAM69CQ0P6D2 419 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 RCN2Q14257 317 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 LONRF3Q496Y0 759 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 TMEM67Q5HYA8 995 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 ANKRD35Q8N283 1001 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 RBBP8NLQ8NC74 664 aaPredicted RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 CASP10Q92851 521 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 BZW2Q9Y6E2 419 aaKnown RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 SH3TC1Q8TE82 1336 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 UGGT1Q9NYU2 1555 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 PREX1Q8TCU6 1659 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 GAS8O95995 478 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 IFIT1P09914 478 aaKnown RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 SKIV2L2P42285 1042 aaKnown RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 AP2B1P63010 937 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 TCP11X2Q5H9J9 407 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 ZNF658Q5TYW1 1059 aaPredicted RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 SPTY2D1Q68D10 685 aaPredicted RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 PASD1Q8IV76 773 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 MB21D1Q8N884 522 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 CATSPER1Q8NEC5 780 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 ZCRB1Q8TBF4 217 aaKnown RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 ATP6V0A1Q93050 837 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 TEKT1Q969V4 418 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 DHTKD1Q96HY7 919 aaPredicted RBP6.67□□□□□ -1.34
PHC3-214ENST00000494943 FTOQ9C0B1 505 aaKnown RBP eCLIP6.67□□□□□ -1.34
PHC3-214ENST00000494943 ZMYND12Q9H0C1 365 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 ISCUQ9H1K1 167 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 DLGAP2Q9P1A6 1054 aa6.67□□□□□ -1.34
PHC3-214ENST00000494943 NEXMIFQ5QGS0 1516 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 IQCA1LA6NCM1 817 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 IGF2BP3O00425 579 aaKnown RBP eCLIP6.66□□□□□ -1.34
PHC3-214ENST00000494943 PDIA3P30101 505 aaKnown RBP6.66□□□□□ -1.34
PHC3-214ENST00000494943 RTN1Q16799 776 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 CC2D2BQ6DHV5 1058 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 CUEDC2Q9H467 287 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 PNPLA6Q8IY17 1366 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 A0A1W2PQJ5 194 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 FAM187AA6NFU0 413 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 IRF6O14896 467 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 MAGOHP61326 146 aaKnown RBP6.66□□□□□ -1.34
PHC3-214ENST00000494943 CDK17Q00537 523 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 TMEM266Q2M3C6 531 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 ZMYM1Q5SVZ6 1142 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 WAPLQ7Z5K2 1190 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 VPS37DQ86XT2 251 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 KIAA0825Q8IV33 1275 aa6.66□□□□□ -1.34
PHC3-214ENST00000494943 NOSTRINQ8IVI9 506 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms