RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 RASSF8Q8NHQ8 419 aa20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 RAB34Q9BZG1 259 aa20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 DDX25Q9UHL0 483 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 PPP2R3BQ9Y5P8 575 aa20.85■□□□□ 0.93
TSPAN4-212ENST00000494815 PP2D1A8MPX8 630 aa20.84■□□□□ 0.93
TSPAN4-212ENST00000494815 PIK3CDO00329 1044 aa20.84■□□□□ 0.93
TSPAN4-212ENST00000494815 GTPBP6O43824 516 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-212ENST00000494815 MYL5Q02045 173 aa20.84■□□□□ 0.93
TSPAN4-212ENST00000494815 PTPN14Q15678 1187 aa20.84■□□□□ 0.93
TSPAN4-212ENST00000494815 RRAGBQ5VZM2 374 aa20.84■□□□□ 0.93
TSPAN4-212ENST00000494815 ZNF592Q92610 1267 aa20.84■□□□□ 0.93
TSPAN4-212ENST00000494815 MAGEF1Q9HAY2 307 aa20.84■□□□□ 0.93
TSPAN4-212ENST00000494815 USP27XA6NNY8 438 aa20.83■□□□□ 0.93
TSPAN4-212ENST00000494815 WDR46O15213 610 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-212ENST00000494815 MYL1P05976 194 aa20.83■□□□□ 0.93
TSPAN4-212ENST00000494815 SKILP12757 684 aa20.83■□□□□ 0.93
TSPAN4-212ENST00000494815 PDIA5Q14554 519 aa20.83■□□□□ 0.93
TSPAN4-212ENST00000494815 CABP7Q86V35 215 aa20.83■□□□□ 0.93
TSPAN4-212ENST00000494815 TMEM51Q9NW97 253 aa20.83■□□□□ 0.93
TSPAN4-212ENST00000494815 ZNF112Q9UJU3 913 aa20.83■□□□□ 0.93
TSPAN4-212ENST00000494815 SBF1O95248 1867 aa20.83■□□□□ 0.93
TSPAN4-212ENST00000494815 CYP3A7-CYP3A51PA0A087WV96 503 aa20.83■□□□□ 0.92
TSPAN4-212ENST00000494815 CYP3A7P24462 503 aa20.83■□□□□ 0.92
TSPAN4-212ENST00000494815 TECP42680 631 aa20.83■□□□□ 0.92
TSPAN4-212ENST00000494815 TXKP42681 527 aa20.83■□□□□ 0.92
TSPAN4-212ENST00000494815 ARID5BQ14865 1188 aa20.83■□□□□ 0.92
TSPAN4-212ENST00000494815 NAALADL2Q58DX5 795 aa20.83■□□□□ 0.92
TSPAN4-212ENST00000494815 CCDC84Q86UT8 332 aaPredicted RBP20.83■□□□□ 0.92
TSPAN4-212ENST00000494815 KIF18AQ8NI77 898 aa20.83■□□□□ 0.92
TSPAN4-212ENST00000494815 CRYGNQ8WXF5 182 aa20.83■□□□□ 0.92
TSPAN4-212ENST00000494815 KIFC2Q96AC6 838 aa20.83■□□□□ 0.92
TSPAN4-212ENST00000494815 KCND1Q9NSA2 647 aa20.83■□□□□ 0.92
TSPAN4-212ENST00000494815 MYH7BA7E2Y1 1941 aa20.82■□□□□ 0.92
TSPAN4-212ENST00000494815 SPDYE3A6NKU9 549 aa20.82■□□□□ 0.92
TSPAN4-212ENST00000494815 OPLAHO14841 1288 aa20.82■□□□□ 0.92
TSPAN4-212ENST00000494815 CCZ1BP86790 482 aa20.82■□□□□ 0.92
TSPAN4-212ENST00000494815 CCZ1P86791 482 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-212ENST00000494815 MBOAT7Q96N66 472 aa20.82■□□□□ 0.92
TSPAN4-212ENST00000494815 MTRQ99707 1265 aa20.82■□□□□ 0.92
TSPAN4-212ENST00000494815 GGA3Q9NZ52 723 aa20.82■□□□□ 0.92
TSPAN4-212ENST00000494815 ZNF397Q8NF99 534 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-212ENST00000494815 SYT17Q9BSW7 474 aa20.82■□□□□ 0.92
TSPAN4-212ENST00000494815 EPS15P42566 896 aa20.81■□□□□ 0.92
TSPAN4-212ENST00000494815 SCYL3Q8IZE3 742 aa20.81■□□□□ 0.92
TSPAN4-212ENST00000494815 LRWD1Q9UFC0 647 aa20.81■□□□□ 0.92
TSPAN4-212ENST00000494815 UTRNP46939 3433 aa20.81■□□□□ 0.92
TSPAN4-212ENST00000494815 INPP5BP32019 993 aa20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 SREBF1P36956 1147 aa20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 ARHGAP4P98171 946 aa20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 KBTBD4Q9NVX7 518 aa20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 PITPNM2Q9BZ72 1349 aa20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 ERCC5P28715 1186 aaPredicted RBP20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 USP14P54578 494 aa20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 SEMA3FQ13275 785 aa20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 CALML4Q96GE6 196 aa20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 WDR18Q9BV38 432 aa20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 RMND1Q9NWS8 449 aa20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 MRPL11Q9Y3B7 192 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-212ENST00000494815 PLCG1P19174 1290 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 HIRAP54198 1017 aaPredicted RBP20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 CCDC174Q6PII3 467 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 CCAR2Q8N163 923 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 PRPF38AQ8NAV1 312 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 STAMQ92783 540 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 HAS1Q92839 578 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 ERO1AQ96HE7 468 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 P2RX7Q99572 595 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 MMTAG2Q9BU76 263 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 FBXO28Q9NVF7 368 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 ZNF215Q9UL58 517 aaPredicted RBP20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 DOCK1Q14185 1865 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 CASP1P29466 404 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 CUL4BQ13620 913 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 ENOX1Q8TC92 643 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 SLF1Q9BQI6 1058 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 AS3MTQ9HBK9 375 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 KCNMB3Q9NPA1 279 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 ABCB11O95342 1321 aa20.79■□□□□ 0.92
TSPAN4-212ENST00000494815 KIF2AO00139 706 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-212ENST00000494815 GSDMDP57764 484 aa20.78■□□□□ 0.92
TSPAN4-212ENST00000494815 FILIP1Q7Z7B0 1213 aa20.78■□□□□ 0.92
TSPAN4-212ENST00000494815 WRNIP1Q96S55 665 aa20.78■□□□□ 0.92
TSPAN4-212ENST00000494815 HSD3B7Q9H2F3 369 aa20.78■□□□□ 0.92
TSPAN4-212ENST00000494815 BLZF1Q9H2G9 400 aa20.78■□□□□ 0.92
TSPAN4-212ENST00000494815 RNF181Q9P0P0 153 aa20.78■□□□□ 0.92
TSPAN4-212ENST00000494815 MARCH6O60337 910 aa20.78■□□□□ 0.92
TSPAN4-212ENST00000494815 LMOD1P29536 600 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-212ENST00000494815 ZNF771Q7L3S4 317 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-212ENST00000494815 PICK1Q9NRD5 415 aa20.78■□□□□ 0.92
TSPAN4-212ENST00000494815 TBX3O15119 743 aa20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 ICAM1P05362 532 aa20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 CYP3A4P08684 503 aa20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 TAL1P17542 331 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 CIITAP33076 1130 aa20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 SUPT20HL1Q3ZLR7 823 aa20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 KMT5BQ4FZB7 885 aa20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 Q4G0T1 1027 aa20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 LDHDQ86WU2 507 aa20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 SLFN12Q8IYM2 578 aa20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 ADARB2Q9NS39 739 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms