RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 TOB2Q14106 344 aaPredicted RBP18.37■□□□□ 0.53
LIME1-209ENST00000494776 STXBP2Q15833 593 aa18.37■□□□□ 0.53
LIME1-209ENST00000494776 WDR11Q9BZH6 1224 aa18.37■□□□□ 0.53
LIME1-209ENST00000494776 AP5M1Q9H0R1 490 aa18.37■□□□□ 0.53
LIME1-209ENST00000494776 PXMP2Q9NR77 195 aa18.37■□□□□ 0.53
LIME1-209ENST00000494776 FAM217BQ9NTX9 383 aaPredicted RBP18.37■□□□□ 0.53
LIME1-209ENST00000494776 NR2E3Q9Y5X4 410 aa18.37■□□□□ 0.53
LIME1-209ENST00000494776 LCTP09848 1927 aa18.37■□□□□ 0.53
LIME1-209ENST00000494776 ADCY6O43306 1168 aa18.36■□□□□ 0.53
LIME1-209ENST00000494776 ADAMTS4O75173 837 aa18.36■□□□□ 0.53
LIME1-209ENST00000494776 NR3C2P08235 984 aa18.36■□□□□ 0.53
LIME1-209ENST00000494776 MYCLP12524 364 aaPredicted RBP18.36■□□□□ 0.53
LIME1-209ENST00000494776 SMPD1P17405 629 aa18.36■□□□□ 0.53
LIME1-209ENST00000494776 PDIA3P30101 505 aaKnown RBP18.36■□□□□ 0.53
LIME1-209ENST00000494776 MKI67P46013 3256 aaKnown RBP18.36■□□□□ 0.53
LIME1-209ENST00000494776 CCT2P78371 535 aaKnown RBP18.36■□□□□ 0.53
LIME1-209ENST00000494776 AKAP17AQ02040 695 aaKnown RBP18.36■□□□□ 0.53
LIME1-209ENST00000494776 GHRHRQ02643 423 aa18.36■□□□□ 0.53
LIME1-209ENST00000494776 TLK2Q86UE8 772 aa18.36■□□□□ 0.53
LIME1-209ENST00000494776 GPKOWQ92917 476 aaPredicted RBP eCLIP18.36■□□□□ 0.53
LIME1-209ENST00000494776 FERMT2Q96AC1 680 aa18.36■□□□□ 0.53
LIME1-209ENST00000494776 LARP6Q9BRS8 491 aaKnown RBP18.36■□□□□ 0.53
LIME1-209ENST00000494776 PSTPIP2Q9H939 334 aa18.36■□□□□ 0.53
LIME1-209ENST00000494776 DYNC1LI2O43237 492 aaPredicted RBP18.35■□□□□ 0.53
LIME1-209ENST00000494776 ATN1P54259 1190 aaPredicted RBP18.35■□□□□ 0.53
LIME1-209ENST00000494776 GJA9P57773 515 aa18.35■□□□□ 0.53
LIME1-209ENST00000494776 C8orf34Q49A92 452 aa18.35■□□□□ 0.53
LIME1-209ENST00000494776 GNASQ5JWF2 1037 aa18.35■□□□□ 0.53
LIME1-209ENST00000494776 SEPT14Q6ZU15 432 aa18.35■□□□□ 0.53
LIME1-209ENST00000494776 PCSK9Q8NBP7 692 aaKnown RBP18.35■□□□□ 0.53
LIME1-209ENST00000494776 SCFD2Q8WU76 684 aa18.35■□□□□ 0.53
LIME1-209ENST00000494776 TSEN34Q9BSV6 310 aaKnown RBP18.35■□□□□ 0.53
LIME1-209ENST00000494776 SLC34A2O95436 690 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 NAPAP54920 295 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 EVCP57679 992 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 FUT2Q10981 343 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 STK3Q13188 491 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 TTLL4Q14679 1199 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 KCNA10Q16322 511 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 DUSP28Q4G0W2 176 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 WWC2Q6AWC2 1192 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 USP17L6PQ6QN14 398 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 C7orf61Q8IZ16 206 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 KLHDC9Q8NEP7 349 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 VTI1AQ96AJ9 217 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 ZNF274Q96GC6 653 aaPredicted RBP18.34■□□□□ 0.53
LIME1-209ENST00000494776 PDCD2LQ9BRP1 358 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 UPF3AQ9H1J1 476 aaKnown RBP18.34■□□□□ 0.53
LIME1-209ENST00000494776 NCOA5Q9HCD5 579 aaKnown RBP18.34■□□□□ 0.53
LIME1-209ENST00000494776 PHF24Q9UPV7 400 aa18.34■□□□□ 0.53
LIME1-209ENST00000494776 GNEQ9Y223 722 aaKnown RBP18.34■□□□□ 0.53
LIME1-209ENST00000494776 NID2Q14112 1375 aa18.33■□□□□ 0.53
LIME1-209ENST00000494776 RBM47A0AV96 593 aaKnown RBP18.33■□□□□ 0.52
LIME1-209ENST00000494776 MYADML2A6NDP7 307 aa18.33■□□□□ 0.52
LIME1-209ENST00000494776 MOXD2PA6NHM9 499 aa18.33■□□□□ 0.52
LIME1-209ENST00000494776 hCG_1984214I3L0E3 225 aa18.33■□□□□ 0.52
LIME1-209ENST00000494776 CPLX1O14810 134 aa18.33■□□□□ 0.52
LIME1-209ENST00000494776 ZEB2O60315 1214 aa18.33■□□□□ 0.52
LIME1-209ENST00000494776 EIF3JO75822 258 aaKnown RBP18.33■□□□□ 0.52
LIME1-209ENST00000494776 TXNP10599 105 aaKnown RBP18.33■□□□□ 0.52
LIME1-209ENST00000494776 CCND2P30279 289 aa18.33■□□□□ 0.52
LIME1-209ENST00000494776 PGM5Q15124 567 aa18.33■□□□□ 0.52
LIME1-209ENST00000494776 ANKRD1Q15327 319 aa18.33■□□□□ 0.52
LIME1-209ENST00000494776 LRRC26Q2I0M4 334 aa18.33■□□□□ 0.52
LIME1-209ENST00000494776 ZNF713Q8N859 430 aaPredicted RBP18.33■□□□□ 0.52
LIME1-209ENST00000494776 RBM27Q9P2N5 1060 aaKnown RBP18.33■□□□□ 0.52
LIME1-209ENST00000494776 Q9Y3F1 56 aa18.33■□□□□ 0.52
LIME1-209ENST00000494776 LRRC37A2A6NM11 1700 aa18.32■□□□□ 0.52
LIME1-209ENST00000494776 A0A1W2PQ45 241 aaPredicted RBP18.32■□□□□ 0.52
LIME1-209ENST00000494776 A0A1W2PQY0 241 aa18.32■□□□□ 0.52
LIME1-209ENST00000494776 PIK3CDO00329 1044 aa18.32■□□□□ 0.52
LIME1-209ENST00000494776 NKRFO15226 690 aaKnown RBP eCLIP18.32■□□□□ 0.521e-11■□□□□ 9.4
LIME1-209ENST00000494776 CST5P28325 142 aaPredicted RBP18.32■□□□□ 0.52
LIME1-209ENST00000494776 ACLYP53396 1101 aa18.32■□□□□ 0.52
LIME1-209ENST00000494776 IRX5P78411 483 aaPredicted RBP18.32■□□□□ 0.52
LIME1-209ENST00000494776 BEX3Q00994 111 aa18.32■□□□□ 0.52
LIME1-209ENST00000494776 FSCN1Q16658 493 aaKnown RBP18.32■□□□□ 0.52
LIME1-209ENST00000494776 TMEM63BQ5T3F8 832 aa18.32■□□□□ 0.52
LIME1-209ENST00000494776 CPLX2Q6PUV4 134 aaKnown RBP18.32■□□□□ 0.52
LIME1-209ENST00000494776 SLC39A5Q6ZMH5 540 aa18.32■□□□□ 0.52
LIME1-209ENST00000494776 OR6J1Q8NGC5 347 aa18.32■□□□□ 0.52
LIME1-209ENST00000494776 PHKBQ93100 1093 aa18.32■□□□□ 0.52
LIME1-209ENST00000494776 SLC26A6Q9BXS9 759 aa18.32■□□□□ 0.52
LIME1-209ENST00000494776 SPDYE3A6NKU9 549 aa18.31■□□□□ 0.52
LIME1-209ENST00000494776 H0YGN5 161 aa18.31■□□□□ 0.52
LIME1-209ENST00000494776 MEIS2O14770 477 aa18.31■□□□□ 0.52
LIME1-209ENST00000494776 PRPF3O43395 683 aaKnown RBP18.31■□□□□ 0.52
LIME1-209ENST00000494776 PPFIA3O75145 1194 aa18.31■□□□□ 0.52
LIME1-209ENST00000494776 ASGR1P07306 291 aa18.31■□□□□ 0.52
LIME1-209ENST00000494776 SCG2P13521 617 aa18.31■□□□□ 0.52
LIME1-209ENST00000494776 PTGS1P23219 599 aa18.31■□□□□ 0.52
LIME1-209ENST00000494776 NEK4P51957 841 aa18.31■□□□□ 0.52
LIME1-209ENST00000494776 PFKFB3Q16875 520 aaPredicted RBP18.31■□□□□ 0.52
LIME1-209ENST00000494776 BRDTQ58F21 947 aaPredicted RBP18.31■□□□□ 0.52
LIME1-209ENST00000494776 PPP1R18Q6NYC8 613 aa18.31■□□□□ 0.52
LIME1-209ENST00000494776 VSIG10LQ86VR7 867 aa18.31■□□□□ 0.52
LIME1-209ENST00000494776 GLT1D1Q96MS3 346 aa18.31■□□□□ 0.52
LIME1-209ENST00000494776 ALDH8A1Q9H2A2 487 aaPredicted RBP18.31■□□□□ 0.52
LIME1-209ENST00000494776 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
LIME1-209ENST00000494776 STARD7Q9NQZ5 370 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms