RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ARHGEF16Q5VV41 709 aa38.51■■■■□ 3.76
CBX4-203ENST00000494546 BADQ92934 168 aa38.51■■■■□ 3.76
CBX4-203ENST00000494546 TMEM39AQ9NV64 488 aa38.51■■■■□ 3.76
CBX4-203ENST00000494546 LIFRP42702 1097 aa38.5■■■■□ 3.75
CBX4-203ENST00000494546 HSD17B4P51659 736 aa38.5■■■■□ 3.75
CBX4-203ENST00000494546 NEK1Q96PY6 1258 aa38.5■■■■□ 3.75
CBX4-203ENST00000494546 MROH7Q68CQ1 1323 aa38.49■■■■□ 3.75
CBX4-203ENST00000494546 ARVCFO00192 962 aa38.49■■■■□ 3.75
CBX4-203ENST00000494546 SOX1O00570 391 aaPredicted RBP38.49■■■■□ 3.75
CBX4-203ENST00000494546 EIF2AK2P19525 551 aaKnown RBP38.49■■■■□ 3.75
CBX4-203ENST00000494546 FAAP100Q0VG06 881 aa38.49■■■■□ 3.75
CBX4-203ENST00000494546 OR6J1Q8NGC5 347 aa38.49■■■■□ 3.75
CBX4-203ENST00000494546 IWS1Q96ST2 819 aa38.49■■■■□ 3.75
CBX4-203ENST00000494546 LTBP2Q14767 1821 aa38.48■■■■□ 3.75
CBX4-203ENST00000494546 CABYRO75952 493 aa38.48■■■■□ 3.75
CBX4-203ENST00000494546 RXRAP19793 462 aa38.48■■■■□ 3.75
CBX4-203ENST00000494546 CDK7P50613 346 aa38.48■■■■□ 3.75
CBX4-203ENST00000494546 RASEFQ8IZ41 740 aa38.48■■■■□ 3.75
CBX4-203ENST00000494546 SLC12A7Q9Y666 1083 aa38.48■■■■□ 3.75
CBX4-203ENST00000494546 BAZ2BQ9UIF8 2168 aaKnown RBP38.47■■■■□ 3.75
CBX4-203ENST00000494546 TXNP10599 105 aaKnown RBP38.47■■■■□ 3.75
CBX4-203ENST00000494546 HOXA13P31271 388 aaPredicted RBP38.47■■■■□ 3.75
CBX4-203ENST00000494546 STXBP2Q15833 593 aa38.47■■■■□ 3.75
CBX4-203ENST00000494546 SEPT14Q6ZU15 432 aa38.47■■■■□ 3.75
CBX4-203ENST00000494546 RAB11FIP4Q86YS3 637 aa38.47■■■■□ 3.75
CBX4-203ENST00000494546 PXMP2Q9NR77 195 aa38.47■■■■□ 3.75
CBX4-203ENST00000494546 KIAA0355O15063 1070 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 NKRFO15226 690 aaKnown RBP eCLIP38.46■■■■□ 3.753e-6■□□□□ 8.1
CBX4-203ENST00000494546 CALM1P0DP23 149 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 CALM2P0DP24 149 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 CALM3P0DP25 149 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 RAG1P15918 1043 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 ITGB8P26012 769 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 GNAQP50148 359 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 GHRHRQ02643 423 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 TTLL4Q14679 1199 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 COPS5Q92905 334 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 RRP36Q96EU6 259 aaKnown RBP38.46■■■■□ 3.75
CBX4-203ENST00000494546 LZTS2Q9BRK4 669 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 SPZ1Q9BXG8 430 aa38.46■■■■□ 3.75
CBX4-203ENST00000494546 MAP3K20Q9NYL2 800 aaKnown RBP38.46■■■■□ 3.75
CBX4-203ENST00000494546 PLEKHA8P1O95397 391 aa38.45■■■■□ 3.75
CBX4-203ENST00000494546 CPT1AP50416 773 aa38.45■■■■□ 3.75
CBX4-203ENST00000494546 GCOM1H8Y6P7 765 aaPredicted RBP38.44■■■■□ 3.74
CBX4-203ENST00000494546 ARIH2O95376 493 aa38.44■■■■□ 3.74
CBX4-203ENST00000494546 POLR2MP0CAP2 368 aa38.44■■■■□ 3.74
CBX4-203ENST00000494546 ADCK5Q3MIX3 580 aa38.44■■■■□ 3.74
CBX4-203ENST00000494546 SAMD3Q8N6K7 520 aa38.44■■■■□ 3.74
CBX4-203ENST00000494546 LRCH3Q96II8 777 aa38.44■■■■□ 3.74
CBX4-203ENST00000494546 TCEANC2Q96MN5 208 aa38.44■■■■□ 3.74
CBX4-203ENST00000494546 NR3C2P08235 984 aa38.43■■■■□ 3.74
CBX4-203ENST00000494546 ITGA7Q13683 1181 aa38.43■■■■□ 3.74
CBX4-203ENST00000494546 KRT32Q14532 448 aa38.43■■■■□ 3.74
CBX4-203ENST00000494546 TSGA10IPQ3SY00 556 aa38.43■■■■□ 3.74
CBX4-203ENST00000494546 CMTR1Q8N1G2 835 aaKnown RBP38.43■■■■□ 3.74
CBX4-203ENST00000494546 SEC63Q9UGP8 760 aaKnown RBP38.43■■■■□ 3.74
CBX4-203ENST00000494546 MYL3P08590 195 aa38.42■■■■□ 3.74
CBX4-203ENST00000494546 SMARCA1P28370 1054 aa38.42■■■■□ 3.74
CBX4-203ENST00000494546 PSMC6P62333 389 aa38.42■■■■□ 3.74
CBX4-203ENST00000494546 DHX32Q7L7V1 743 aaKnown RBP38.42■■■■□ 3.74
CBX4-203ENST00000494546 FAM126BQ8IXS8 530 aa38.42■■■■□ 3.74
CBX4-203ENST00000494546 SRBD1Q8N5C6 995 aaKnown RBP38.42■■■■□ 3.74
CBX4-203ENST00000494546 POLR3EQ9NVU0 708 aa38.42■■■■□ 3.74
CBX4-203ENST00000494546 TLR3O15455 904 aaKnown RBP38.41■■■■□ 3.74
CBX4-203ENST00000494546 EXOSC10Q01780 885 aaKnown RBP38.41■■■■□ 3.74
CBX4-203ENST00000494546 LRIT3Q3SXY7 679 aa38.41■■■■□ 3.74
CBX4-203ENST00000494546 BRDTQ58F21 947 aaPredicted RBP38.41■■■■□ 3.74
CBX4-203ENST00000494546 SYNE3Q6ZMZ3 975 aa38.41■■■■□ 3.74
CBX4-203ENST00000494546 SGMS1Q86VZ5 419 aa38.41■■■■□ 3.74
CBX4-203ENST00000494546 FCHSD1Q86WN1 690 aa38.41■■■■□ 3.74
CBX4-203ENST00000494546 MICU3Q86XE3 530 aa38.41■■■■□ 3.74
CBX4-203ENST00000494546 MYCLP12524 364 aaPredicted RBP38.4■■■■□ 3.74
CBX4-203ENST00000494546 CCDC62Q6P9F0 684 aa38.4■■■■□ 3.74
CBX4-203ENST00000494546 SLC43A3Q8NBI5 491 aa38.4■■■■□ 3.74
CBX4-203ENST00000494546 PDCD2LQ9BRP1 358 aa38.4■■■■□ 3.74
CBX4-203ENST00000494546 TBX21Q9UL17 535 aa38.4■■■■□ 3.74
CBX4-203ENST00000494546 GRIN2DO15399 1336 aa38.39■■■■□ 3.74
CBX4-203ENST00000494546 EIF3JO75822 258 aaKnown RBP38.39■■■■□ 3.74
CBX4-203ENST00000494546 LY6KQ17RY6 165 aa38.39■■■■□ 3.74
CBX4-203ENST00000494546 FANCBQ8NB91 859 aa38.39■■■■□ 3.74
CBX4-203ENST00000494546 PURAQ00577 322 aaKnown RBP38.38■■■■□ 3.73
CBX4-203ENST00000494546 CCDC82Q8N4S0 544 aa38.38■■■■□ 3.73
CBX4-203ENST00000494546 PPP4R2Q9NY27 417 aa38.38■■■■□ 3.73
CBX4-203ENST00000494546 TIMP1P01033 207 aa38.36■■■■□ 3.73
CBX4-203ENST00000494546 PGM5Q15124 567 aa38.36■■■■□ 3.73
CBX4-203ENST00000494546 SHHQ15465 462 aa38.36■■■■□ 3.73
CBX4-203ENST00000494546 MTG1Q9BT17 334 aaPredicted RBP38.36■■■■□ 3.73
CBX4-203ENST00000494546 SEZ6LQ9BYH1 1024 aa38.36■■■■□ 3.73
CBX4-203ENST00000494546 MRVI1Q9Y6F6 885 aa38.36■■■■□ 3.73
CBX4-203ENST00000494546 A6NJR5 290 aa38.35■■■■□ 3.73
CBX4-203ENST00000494546 GH1P01241 217 aa38.35■■■■□ 3.73
CBX4-203ENST00000494546 CD4P01730 458 aa38.35■■■■□ 3.73
CBX4-203ENST00000494546 C9orf50Q5SZB4 431 aa38.35■■■■□ 3.73
CBX4-203ENST00000494546 APOA5Q6Q788 366 aa38.35■■■■□ 3.73
CBX4-203ENST00000494546 TMTC3Q6ZXV5 915 aa38.35■■■■□ 3.73
CBX4-203ENST00000494546 IL31RAQ8NI17 732 aa38.35■■■■□ 3.73
CBX4-203ENST00000494546 REC8O95072 547 aa38.34■■■■□ 3.73
CBX4-203ENST00000494546 HMGB1P09429 215 aaKnown RBP38.34■■■■□ 3.73
CBX4-203ENST00000494546 HSPA4P34932 840 aa38.34■■■■□ 3.73
CBX4-203ENST00000494546 FPGSQ05932 587 aa38.34■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms