RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 NLRC3Q7RTR2 1065 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 GLCCI1Q86VQ1 547 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 DNAJC10Q8IXB1 793 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 AMER2Q8N7J2 671 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 NETO2Q8NC67 525 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 VOPP1Q96AW1 172 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 TMEM74Q96NL1 305 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 DSCC1Q9BVC3 393 aa3.81□□□□□ -1.8
PTPN12-212ENST00000494248 DAB2P98082 770 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 POU4F1Q01851 419 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 FAM196AQ6ZSG2 479 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 SCUBE1Q8IWY4 988 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 C7orf61Q8IZ16 206 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 LZTR1Q8N653 840 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 TTLL6Q8N841 843 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 BRF1Q92994 677 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 MCMBPQ9BTE3 642 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 LRRC3Q9BY71 257 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 SEMA4AQ9H3S1 761 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 IVNS1ABPQ9Y6Y0 642 aa3.8□□□□□ -1.8
PTPN12-212ENST00000494248 A0A087X1B8 175 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 NME1P15531 152 aaKnown RBP3.79□□□□□ -1.8
PTPN12-212ENST00000494248 GBP2P32456 591 aaPredicted RBP3.79□□□□□ -1.8
PTPN12-212ENST00000494248 CCNFP41002 786 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 ZNF445P59923 1031 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 KCNA1Q09470 495 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 ADAM9Q13443 819 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 MLECQ14165 292 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 SNAP47Q5SQN1 464 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 PCSK4Q6UW60 755 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 CD300LDQ6UXZ3 194 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 YTHDC1Q96MU7 727 aaKnown RBP3.79□□□□□ -1.8
PTPN12-212ENST00000494248 SLC9A7Q96T83 725 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 RSRP1Q9BUV0 290 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 KCNQ5Q9NR82 932 aa3.79□□□□□ -1.8
PTPN12-212ENST00000494248 MINDY4BA8MYZ0 360 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 FOXS1O43638 330 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 ZBTB7AO95365 584 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 TBC1D8O95759 1140 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 MLLT6P55198 1093 aaPredicted RBP3.78□□□□□ -1.8
PTPN12-212ENST00000494248 PWP1Q13610 501 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 SLFN13Q68D06 897 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 CWF19L1Q69YN2 538 aaKnown RBP3.78□□□□□ -1.8
PTPN12-212ENST00000494248 WWC2Q6AWC2 1192 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 PLEKHH3Q7Z736 793 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 LDLRAD3Q86YD5 345 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 MIB1Q86YT6 1006 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 KBTBD2Q8IY47 623 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 EXTL1Q92935 676 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 AGAP2Q99490 1192 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 EHMT1Q9H9B1 1298 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 GULP1Q9UBP9 304 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 NUDT5Q9UKK9 219 aa3.78□□□□□ -1.8
PTPN12-212ENST00000494248 TNFRSF10CO14798 259 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 B4GALT4O60513 344 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 NTRK1P04629 796 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 CRKP46108 304 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 CLCQ05315 142 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 NRN1LQ496H8 165 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 USP39Q53GS9 565 aaKnown RBP3.77□□□□□ -1.81
PTPN12-212ENST00000494248 EAPPQ56P03 285 aaPredicted RBP3.77□□□□□ -1.81
PTPN12-212ENST00000494248 DCAF15Q66K64 600 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 FBXL19Q6PCT2 694 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 ETV3LQ6ZN32 361 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 ARHGEF18Q6ZSZ5 1173 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 TMC4Q7Z404 712 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 CABP7Q86V35 215 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 PPFIBP1Q86W92 1011 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 ZG16BQ96DA0 208 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 GNRHR2Q96P88 292 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 JADE2Q9NQC1 790 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 PARP2Q9UGN5 583 aa3.77□□□□□ -1.81
PTPN12-212ENST00000494248 ROBO2Q9HCK4 1378 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 FAM86C2PA6NEL3 165 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 SGSM2O43147 1006 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 CYP1A1P04798 512 aaPredicted RBP3.76□□□□□ -1.81
PTPN12-212ENST00000494248 CD3EP07766 207 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 IL13P35225 146 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 STAT5AP42229 794 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 INHBCP55103 352 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 PSMD2Q13200 908 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 CWF19L2Q2TBE0 894 aaKnown RBP3.76□□□□□ -1.81
PTPN12-212ENST00000494248 CR1LQ2VPA4 569 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 TDRD10Q5VZ19 366 aaKnown RBP3.76□□□□□ -1.81
PTPN12-212ENST00000494248 DPY19L2P1Q6NXN4 242 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 FIBCD1Q8N539 461 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 NEU4Q8WWR8 484 aaPredicted RBP3.76□□□□□ -1.81
PTPN12-212ENST00000494248 ZCCHC14Q8WYQ9 949 aaKnown RBP3.76□□□□□ -1.81
PTPN12-212ENST00000494248 CRAMP1Q96RY5 1269 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 GP6Q9HCN6 339 aa3.76□□□□□ -1.81
PTPN12-212ENST00000494248 SUCOQ9UBS9 1254 aaKnown RBP3.76□□□□□ -1.81
PTPN12-212ENST00000494248 NOP2P46087 812 aaKnown RBP3.75□□□□□ -1.81
PTPN12-212ENST00000494248 PTH1RQ03431 593 aa3.75□□□□□ -1.81
PTPN12-212ENST00000494248 PRKD1Q15139 912 aaPredicted RBP3.75□□□□□ -1.81
PTPN12-212ENST00000494248 LSM12Q3MHD2 195 aaKnown RBP3.75□□□□□ -1.81
PTPN12-212ENST00000494248 AXDND1Q5T1B0 1012 aaPredicted RBP3.75□□□□□ -1.81
PTPN12-212ENST00000494248 PRAMEF18Q5VWM3 479 aa3.75□□□□□ -1.81
PTPN12-212ENST00000494248 TCTN3Q6NUS6 607 aa3.75□□□□□ -1.81
PTPN12-212ENST00000494248 CPNE8Q86YQ8 564 aa3.75□□□□□ -1.81
PTPN12-212ENST00000494248 RELL1Q8IUW5 271 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms