RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 MOXD2PA6NHM9 499 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 PQBP1O60828 265 aaKnown RBP17.01■□□□□ 0.31
ATG4B-224ENST00000494132 ARIH2O95376 493 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 CALM1P0DP23 149 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 CALM2P0DP24 149 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 CALM3P0DP25 149 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 MAGEA10P43363 369 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-224ENST00000494132 HSD17B4P51659 736 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 FGD1P98174 961 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 TLE2Q04725 743 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 SNX17Q15036 470 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 CXCL17Q6UXB2 119 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 SYNE3Q6ZMZ3 975 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 SEPT14Q6ZU15 432 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 Q6ZUG5 572 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 FANCBQ8NB91 859 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 PCSK9Q8NBP7 692 aaKnown RBP17.01■□□□□ 0.31
ATG4B-224ENST00000494132 NSUN6Q8TEA1 469 aaKnown RBP17.01■□□□□ 0.31
ATG4B-224ENST00000494132 PXMP2Q9NR77 195 aa17.01■□□□□ 0.31
ATG4B-224ENST00000494132 SEC63Q9UGP8 760 aaKnown RBP17.01■□□□□ 0.31
ATG4B-224ENST00000494132 LOC102724159A0A0B4J2E5 919 aa17■□□□□ 0.31
ATG4B-224ENST00000494132 MYCLP12524 364 aaPredicted RBP17■□□□□ 0.31
ATG4B-224ENST00000494132 GNAQP50148 359 aa17■□□□□ 0.31
ATG4B-224ENST00000494132 APOBRQ0VD83 1088 aa17■□□□□ 0.31
ATG4B-224ENST00000494132 PPP2R5BQ15173 497 aa17■□□□□ 0.31
ATG4B-224ENST00000494132 PWP2Q15269 919 aaKnown RBP17■□□□□ 0.31
ATG4B-224ENST00000494132 FSCN1Q16658 493 aaKnown RBP17■□□□□ 0.31
ATG4B-224ENST00000494132 DUSP28Q4G0W2 176 aa17■□□□□ 0.31
ATG4B-224ENST00000494132 BLOC1S2Q6QNY1 142 aa17■□□□□ 0.31
ATG4B-224ENST00000494132 TMTC3Q6ZXV5 915 aa17■□□□□ 0.31
ATG4B-224ENST00000494132 SH3RF1Q7Z6J0 888 aa17■□□□□ 0.31
ATG4B-224ENST00000494132 IL31RAQ8NI17 732 aa17■□□□□ 0.31
ATG4B-224ENST00000494132 GLT1D1Q96MS3 346 aa17■□□□□ 0.31
ATG4B-224ENST00000494132 CNTNAP5Q8WYK1 1306 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 RBM47A0AV96 593 aaKnown RBP16.99■□□□□ 0.31
ATG4B-224ENST00000494132 GOLGA8AA7E2F4 631 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 GOLGA8BA8MQT2 603 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 B4DLN1 442 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 GCOM1H8Y6P7 765 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-224ENST00000494132 ZBTB43O43298 467 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 NR3C2P08235 984 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 POLR2MP0CAP2 368 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 CASTP20810 708 aaKnown RBP16.99■□□□□ 0.31
ATG4B-224ENST00000494132 MRPL12P52815 198 aaKnown RBP16.99■□□□□ 0.31
ATG4B-224ENST00000494132 RTN1Q16799 776 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 OR6J1Q8NGC5 347 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 SCFD2Q8WU76 684 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 GPKOWQ92917 476 aaPredicted RBP eCLIP16.99■□□□□ 0.311e-8■□□□□ 9
ATG4B-224ENST00000494132 BRF1Q92994 677 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 GDF15Q99988 308 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 LZTS2Q9BRK4 669 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 PRO3102Q9H379 93 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 PDLIM7Q9NR12 457 aa16.99■□□□□ 0.31
ATG4B-224ENST00000494132 SLC34A2O95436 690 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
ATG4B-224ENST00000494132 TXNP10599 105 aaKnown RBP16.98■□□□□ 0.31
ATG4B-224ENST00000494132 RPS6KB1P23443 525 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 SMARCA1P28370 1054 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 CDC27P30260 824 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 PSMC6P62333 389 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 GHRHRQ02643 423 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 PGM5Q15124 567 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 STXBP2Q15833 593 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 USP17L6PQ6QN14 398 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 PPP1R13LQ8WUF5 828 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 PDCD2LQ9BRP1 358 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 USP26Q9BXU7 913 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 PRKAG2Q9UGJ0 569 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 SCN10AQ9Y5Y9 1956 aa16.98■□□□□ 0.31
ATG4B-224ENST00000494132 TRIM43BA6NCK2 446 aa16.97■□□□□ 0.31
ATG4B-224ENST00000494132 SORBS3O60504 671 aa16.97■□□□□ 0.31
ATG4B-224ENST00000494132 MYL3P08590 195 aa16.97■□□□□ 0.31
ATG4B-224ENST00000494132 NKX3-2P78367 333 aa16.97■□□□□ 0.31
ATG4B-224ENST00000494132 TRAF1Q13077 416 aa16.97■□□□□ 0.31
ATG4B-224ENST00000494132 TTLL4Q14679 1199 aa16.97■□□□□ 0.31
ATG4B-224ENST00000494132 LY6KQ17RY6 165 aa16.97■□□□□ 0.31
ATG4B-224ENST00000494132 C1orf53Q5VUE5 145 aa16.97■□□□□ 0.31
ATG4B-224ENST00000494132 TRIM43Q96BQ3 446 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-224ENST00000494132 IWS1Q96ST2 819 aa16.97■□□□□ 0.31
ATG4B-224ENST00000494132 MAF1Q9H063 256 aa16.97■□□□□ 0.31
ATG4B-224ENST00000494132 A0A0U1RQG5 324 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-224ENST00000494132 CLTBP09497 229 aa16.96■□□□□ 0.31
ATG4B-224ENST00000494132 HEATR3Q7Z4Q2 680 aa16.96■□□□□ 0.31
ATG4B-224ENST00000494132 SMARCC2Q8TAQ2 1214 aa16.96■□□□□ 0.31
ATG4B-224ENST00000494132 UBE2OQ9C0C9 1292 aaKnown RBP16.96■□□□□ 0.31
ATG4B-224ENST00000494132 FAM217BQ9NTX9 383 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-224ENST00000494132 RBM28Q9NW13 759 aaKnown RBP16.96■□□□□ 0.31
ATG4B-224ENST00000494132 MAP3K20Q9NYL2 800 aaKnown RBP16.96■□□□□ 0.31
ATG4B-224ENST00000494132 Q9Y3F1 56 aa16.96■□□□□ 0.31
ATG4B-224ENST00000494132 RANBP2P49792 3224 aaKnown RBP16.96■□□□□ 0.31
ATG4B-224ENST00000494132 ELP1O95163 1332 aa16.96■□□□□ 0.3
ATG4B-224ENST00000494132 TRIP12Q14669 1992 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-224ENST00000494132 ARVCFO00192 962 aa16.95■□□□□ 0.3
ATG4B-224ENST00000494132 ZEB2O60315 1214 aa16.95■□□□□ 0.3
ATG4B-224ENST00000494132 PPFIA3O75145 1194 aa16.95■□□□□ 0.3
ATG4B-224ENST00000494132 RGS20O76081 388 aa16.95■□□□□ 0.3
ATG4B-224ENST00000494132 ITGB8P26012 769 aa16.95■□□□□ 0.3
ATG4B-224ENST00000494132 PSMA5P28066 241 aa16.95■□□□□ 0.3
ATG4B-224ENST00000494132 METAP2P50579 478 aaKnown RBP eCLIP16.95■□□□□ 0.3
ATG4B-224ENST00000494132 FAAP100Q0VG06 881 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms