RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 TLR3O15455 904 aaKnown RBP11.35□□□□□ -0.59
UFD1-210ENST00000494054 CFBP00751 764 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 MYL3P08590 195 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 TXNP10599 105 aaKnown RBP11.35□□□□□ -0.59
UFD1-210ENST00000494054 CSF2RAP15509 400 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 PURAQ00577 322 aaKnown RBP11.35□□□□□ -0.59
UFD1-210ENST00000494054 PPP2R5BQ15173 497 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 TMEM67Q5HYA8 995 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 FAM109BQ6ICB4 259 aaPredicted RBP11.35□□□□□ -0.59
UFD1-210ENST00000494054 CCDC62Q6P9F0 684 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 SEPT14Q6ZU15 432 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 HOMER1Q86YM7 354 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 NSUN6Q8TEA1 469 aaKnown RBP11.35□□□□□ -0.59
UFD1-210ENST00000494054 PPP1R13LQ8WUF5 828 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 RNPC3Q96LT9 517 aaKnown RBP11.35□□□□□ -0.59
UFD1-210ENST00000494054 FAM161BQ96MY7 647 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 GUCD1Q96NT3 240 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.35□□□□□ -0.596e-7■■□□□ 14.1
UFD1-210ENST00000494054 ESYT1Q9BSJ8 1104 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 PCDHA1Q9Y5I3 950 aa11.35□□□□□ -0.59
UFD1-210ENST00000494054 B4DLN1 442 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 SLC27A2O14975 620 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 NKRFO15226 690 aaKnown RBP eCLIP11.34□□□□□ -0.59
UFD1-210ENST00000494054 B4GALT4O60513 344 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 ACRP10323 421 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 EIF2AK2P19525 551 aaKnown RBP11.34□□□□□ -0.59
UFD1-210ENST00000494054 HOXA13P31271 388 aaPredicted RBP11.34□□□□□ -0.59
UFD1-210ENST00000494054 CPT1AP50416 773 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 HSD17B4P51659 736 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 MRPL12P52815 198 aaKnown RBP11.34□□□□□ -0.59
UFD1-210ENST00000494054 GHRHRQ02643 423 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 TTLL4Q14679 1199 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 LY6KQ17RY6 165 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 TMEM240Q5SV17 173 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 IWS1Q96ST2 819 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 MYL10Q9BUA6 226 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 NOC4LQ9BVI4 516 aaKnown RBP11.34□□□□□ -0.59
UFD1-210ENST00000494054 ALDH8A1Q9H2A2 487 aaPredicted RBP11.34□□□□□ -0.59
UFD1-210ENST00000494054 LY9Q9HBG7 655 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 PXMP2Q9NR77 195 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 POLR3EQ9NVU0 708 aa11.34□□□□□ -0.59
UFD1-210ENST00000494054 MYH6P13533 1939 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 BAZ2BQ9UIF8 2168 aaKnown RBP11.33□□□□□ -0.6
UFD1-210ENST00000494054 PRC1O43663 620 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 NR3C2P08235 984 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 SMAD3P84022 425 aaKnown RBP11.33□□□□□ -0.6
UFD1-210ENST00000494054 ARHGAP1Q07960 439 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 PPIGQ13427 754 aaKnown RBP eCLIP11.33□□□□□ -0.63e-6■□□□□ 8.3
UFD1-210ENST00000494054 SART3Q15020 963 aaKnown RBP11.33□□□□□ -0.6
UFD1-210ENST00000494054 NECTIN1Q15223 517 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 STXBP2Q15833 593 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 NBPF20Q3BBV1 942 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 ARHGEF16Q5VV41 709 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 CREB3L3Q68CJ9 461 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 ZNF365Q70YC5 407 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 CENPQQ7L2Z9 268 aaPredicted RBP11.33□□□□□ -0.6
UFD1-210ENST00000494054 CATIPQ7Z7H3 387 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 TMEM199Q8N511 208 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 AFG1LQ8WV93 481 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 PIBF1Q8WXW3 757 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 MTG1Q9BT17 334 aaPredicted RBP11.33□□□□□ -0.6
UFD1-210ENST00000494054 SEZ6LQ9BYH1 1024 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 TTYH1Q9H313 450 aaPredicted RBP11.33□□□□□ -0.6
UFD1-210ENST00000494054 HIPK3Q9H422 1215 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 TRMT13Q9NUP7 481 aaKnown RBP11.33□□□□□ -0.6
UFD1-210ENST00000494054 DDX41Q9UJV9 622 aaKnown RBP11.33□□□□□ -0.6
UFD1-210ENST00000494054 STXBP5LQ9Y2K9 1186 aa11.33□□□□□ -0.6
UFD1-210ENST00000494054 PNMA6FA0A0J9YX94 578 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 EIF3JO75822 258 aaKnown RBP11.32□□□□□ -0.6
UFD1-210ENST00000494054 RGS20O76081 388 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 CYP2C9P11712 490 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 MYCLP12524 364 aaPredicted RBP11.32□□□□□ -0.6
UFD1-210ENST00000494054 CCL23P55773 120 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 BMP2KLQ5H9B9 411 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 RASIP1Q5U651 963 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 ZNF654Q8IZM8 581 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 IL31RAQ8NI17 732 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 VWCEQ96DN2 955 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 ZFP91Q96JP5 570 aaPredicted RBP11.32□□□□□ -0.6
UFD1-210ENST00000494054 PDCD2LQ9BRP1 358 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 WNT8AQ9H1J5 351 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 ANO2Q9NQ90 1003 aa11.32□□□□□ -0.6
UFD1-210ENST00000494054 GRXCR1A8MXD5 290 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 SH2B2O14492 632 aaPredicted RBP11.31□□□□□ -0.6
UFD1-210ENST00000494054 KPNA6O60684 536 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 GH1P01241 217 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 MMP3P08254 477 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 MCM5P33992 734 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 BRDTQ58F21 947 aaPredicted RBP11.31□□□□□ -0.6
UFD1-210ENST00000494054 FAM47CQ5HY64 1035 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 ZNF697Q5TEC3 545 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 CASC1Q6TDU7 716 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 VSIG10LQ86VR7 867 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 KAT2BQ92831 832 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 SCLYQ96I15 445 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 MAP3K14Q99558 947 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 CDX2Q99626 313 aaPredicted RBP11.31□□□□□ -0.6
UFD1-210ENST00000494054 MTA3Q9BTC8 594 aa11.31□□□□□ -0.6
UFD1-210ENST00000494054 LRRC2Q9BYS8 371 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms