RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TRIM9Q9C026 710 aa15.42■□□□□ 0.06
VCP-207ENST00000493886 ZSWIM4Q9H7M6 989 aa15.42■□□□□ 0.06
VCP-207ENST00000493886 LIMA1Q9UHB6 759 aaKnown RBP15.42■□□□□ 0.06
VCP-207ENST00000493886 ARHGAP6O43182 974 aa15.42■□□□□ 0.06
VCP-207ENST00000493886 CCP110O43303 1012 aa15.42■□□□□ 0.06
VCP-207ENST00000493886 SPAG1Q07617 926 aa15.42■□□□□ 0.06
VCP-207ENST00000493886 KRT31Q15323 416 aa15.42■□□□□ 0.06
VCP-207ENST00000493886 C7orf25Q9BPX7 421 aa15.42■□□□□ 0.06
VCP-207ENST00000493886 A0A0U1RQJ8 604 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 F5H6K3 240 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 H2AFXP16104 143 aaPredicted RBP15.41■□□□□ 0.06
VCP-207ENST00000493886 KLRC3Q07444 240 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 CDC37Q16543 378 aaPredicted RBP15.41■□□□□ 0.06
VCP-207ENST00000493886 CREBRFQ8IUR6 639 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 GIMAP8Q8ND71 665 aaPredicted RBP15.41■□□□□ 0.06
VCP-207ENST00000493886 ATRIPQ8WXE1 791 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 CSRNP1Q96S65 589 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 PCDHA1Q9Y5I3 950 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 COL2A1P02458 1487 aaPredicted RBP15.41■□□□□ 0.06
VCP-207ENST00000493886 PHLPP2Q6ZVD8 1323 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 PSME4Q14997 1843 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 LRRC10BA6NIK2 292 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 CCT6AP40227 531 aaKnown RBP15.41■□□□□ 0.06
VCP-207ENST00000493886 STIM1Q13586 685 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 TEX35Q5T0J7 233 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 RBM26Q5T8P6 1007 aaKnown RBP15.41■□□□□ 0.06
VCP-207ENST00000493886 RSBN1LQ6PCB5 846 aaPredicted RBP15.41■□□□□ 0.06
VCP-207ENST00000493886 FCHSD1Q86WN1 690 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 RTKN2Q8IZC4 609 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 GMCL1P1Q8NEA9 526 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 RAB34Q9BZG1 259 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 GLT8D2Q9H1C3 349 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 PRDM16Q9HAZ2 1276 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
VCP-207ENST00000493886 MYH7BA7E2Y1 1941 aa15.41■□□□□ 0.06
VCP-207ENST00000493886 H7C1D1 291 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 STX10O60499 249 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 GH2P01242 217 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 JAG1P78504 1218 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 AMPD3Q01432 767 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 GRB10Q13322 594 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 PDIA5Q14554 519 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 TCP11X2Q5H9J9 407 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 CCDC47Q96A33 483 aaKnown RBP15.4■□□□□ 0.06
VCP-207ENST00000493886 TMOD2Q9NZR1 351 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 DDX25Q9UHL0 483 aaKnown RBP15.4■□□□□ 0.06
VCP-207ENST00000493886 TRIM49BA6NDI0 452 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 POTEMA6NI47 508 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 SOWAHDA6NJG2 315 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 KCNJ18B7U540 433 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 AKR1B15C9JRZ8 316 aaPredicted RBP15.4■□□□□ 0.06
VCP-207ENST00000493886 ZSCAN12O43309 604 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 RAD17O75943 681 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 ASIC1P78348 528 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 KCNJ12Q14500 433 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 ANKRD20A12PQ8NF67 263 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 PSMD1Q99460 953 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 LZTFL1Q9NQ48 299 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 USP17L15C9J2P7 530 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 USP17L13C9JLJ4 530 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 USP17L11C9JVI0 530 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 USP17L18D6R9N7 530 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 USP17L22D6RA61 530 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 USP17L17D6RBQ6 530 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 USP17L19D6RCP7 530 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 USP17L20D6RJB6 530 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 PSMA7O14818 248 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 N4BP3O15049 544 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 NDUFB10O96000 172 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 COPB1P53618 953 aaKnown RBP15.4■□□□□ 0.06
VCP-207ENST00000493886 GABPB1Q06547 395 aaPredicted RBP15.4■□□□□ 0.06
VCP-207ENST00000493886 USP17L24Q0WX57 530 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 RRP1BQ14684 758 aaKnown RBP15.4■□□□□ 0.06
VCP-207ENST00000493886 TERF2Q15554 542 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 USP17L6PQ6QN14 398 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 PPFIBP1Q86W92 1011 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 LARGE2Q8N3Y3 721 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 GMCL1Q96IK5 515 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 PNMA5Q96PV4 448 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 NUP88Q99567 741 aaPredicted RBP15.4■□□□□ 0.06
VCP-207ENST00000493886 EXOC1Q9NV70 894 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 STK17AQ9UEE5 414 aa15.4■□□□□ 0.06
VCP-207ENST00000493886 ARFGEF1Q9Y6D6 1849 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 TCP10L2B9ZVM9 353 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 PSMD14O00487 310 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 GCFC2P16383 781 aaKnown RBP15.39■□□□□ 0.05
VCP-207ENST00000493886 PMS1P54277 932 aaKnown RBP15.39■□□□□ 0.05
VCP-207ENST00000493886 PDE4DQ08499 809 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 TMEM132AQ24JP5 1023 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 CDK5RAP3Q96JB5 506 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 VPS16Q9H269 839 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 BLOC1S4Q9NUP1 217 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 TAB2Q9NYJ8 693 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 TADA3O75528 432 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 VIL1P09327 827 aaKnown RBP15.39■□□□□ 0.05
VCP-207ENST00000493886 CAPN2P17655 700 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 CASQ1P31415 396 aa15.39■□□□□ 0.05
VCP-207ENST00000493886 RBL2Q08999 1139 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms