RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 SLFN12Q8IYM2 578 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 TC2NQ8N9U0 490 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 SNX29Q8TEQ0 813 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 CRYGNQ8WXF5 182 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 HAS1Q92839 578 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 CCDC51Q96ER9 411 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 PLIN2Q99541 437 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 NAA15Q9BXJ9 866 aaKnown RBP12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 BLOC1S4Q9NUP1 217 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 ZBTB21Q9ULJ3 1066 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 A0A1W2PRG0 241 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 KCNJ18B7U540 433 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 MAP3K10Q02779 954 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 IKQ13123 557 aaPredicted RBP12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 KCNJ12Q14500 433 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 RAD54LQ92698 747 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 PPP1R13BQ96KQ4 1090 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 BAG1Q99933 345 aaPredicted RBP12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 KCNMB3Q9NPA1 279 aa12.1□□□□□ -0.47
PHACTR4-204ENST00000493669 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.1□□□□□ -0.472e-6■■□□□ 13.8
PHACTR4-204ENST00000493669 AKR1B15C9JRZ8 316 aaPredicted RBP12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 PIK3CDO00329 1044 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 ZSCAN12O43309 604 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 CCNE1P24864 410 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 COPB1P53618 953 aaKnown RBP12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 PDE4DQ08499 809 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 UNC13DQ70J99 1090 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 PPFIBP1Q86W92 1011 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 CCDC125Q86Z20 511 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 PCDHA12Q9UN75 941 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 GOLGA6L9A6NEM1 432 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 USP17L15C9J2P7 530 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 USP17L13C9JLJ4 530 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 USP17L11C9JVI0 530 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 USP17L18D6R9N7 530 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 USP17L22D6RA61 530 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 USP17L17D6RBQ6 530 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 USP17L19D6RCP7 530 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 USP17L20D6RJB6 530 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 MARCH6O60337 910 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 TPM1P09493 284 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 SREBF1P36956 1147 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 STAT2P52630 851 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 USP17L24Q0WX57 530 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 Q4G0T1 1027 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 FOXR2Q6PJQ5 311 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 USP17L6PQ6QN14 398 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 PRR12Q9ULL5 1215 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 FER1L6Q2WGJ9 1857 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 POTEMA6NI47 508 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 POLD1P28340 1107 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 ARHGAP4P98171 946 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 TNIP1Q15025 636 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 DALRD3Q5D0E6 543 aaKnown RBP12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 CIAPIN1Q6FI81 312 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 TTI2Q6NXR4 508 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 CNGA4Q8IV77 575 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 FAM114A1Q8IWE2 563 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 NUP88Q99567 741 aaPredicted RBP12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 TAOK3Q9H2K8 898 aa12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
PHACTR4-204ENST00000493669 SPDYE3A6NKU9 549 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 N4BP3O15049 544 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 TEX33O43247 280 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 RPS12P25398 132 aaKnown RBP12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 CIITAP33076 1130 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 CXCL9Q07325 125 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 PSMD2Q13200 908 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 FAM160B2Q86V87 743 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 KIF18AQ8NI77 898 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 CHURC1Q8WUH1 139 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 P2RX5Q93086 422 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 VEZTQ9HBM0 779 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 GINM1Q9NU53 330 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 TRMT1Q9NXH9 659 aaKnown RBP12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 BRCA1P38398 1863 aaKnown RBP12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 JDP2Q8WYK2 163 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 TRIM47Q96LD4 638 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 VCPKMTQ9H867 229 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 MAGEC2Q9UBF1 373 aaPredicted RBP12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 PGAP2Q9UHJ9 254 aa12.08□□□□□ -0.48
PHACTR4-204ENST00000493669 CYP3A4P08684 503 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 FECHP22830 423 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 CAP2P40123 477 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 FAM20AQ96MK3 541 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 A0A1W2PQC6 194 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 MYMKA6NI61 221 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 CTIFO43310 598 aaKnown RBP12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 MCM6Q14566 821 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 HAUS3Q68CZ6 603 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 IRF2BP1Q8IU81 584 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 KCTD17Q8N5Z5 321 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 MAPK8IP1Q9UQF2 711 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 MFAP3LO75121 409 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 ASNSP08243 561 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 ZNF280AP59817 542 aaPredicted RBP12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 TNFAIP1Q13829 316 aa12.07□□□□□ -0.48
PHACTR4-204ENST00000493669 SYCP1Q15431 976 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms