RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 UBE2HP62256 183 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 EAPPQ56P03 285 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 C1QTNF12Q5T7M4 302 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 PRAMEF18Q5VWM3 479 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 FAM173BQ6P4H8 233 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 RINLQ6ZS11 566 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 HOMER1Q86YM7 354 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 EFCAB13Q8IY85 973 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 RBM46Q8TBY0 533 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 GPKOWQ92917 476 aaPredicted RBP eCLIP8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 TATDN2Q93075 761 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 SMARCE1Q969G3 411 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 MIEF2Q96C03 454 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 FAXDC2Q96IV6 333 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 CPVLQ9H3G5 476 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 KCNF1Q9H3M0 494 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 VAT1LQ9HCJ6 419 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 A1CFQ9NQ94 594 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 PNMA2Q9UL42 364 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 CSADQ9Y600 493 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 A0A0G2JMZ2 1700 aa8.14□□□□□ -1.11
SMARCE1-211ENST00000493660 COL11A1P12107 1806 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 EIF3CLB5ME19 914 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 M0R2N6 131 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 RAD21O60216 631 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 BMP15O95972 392 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 SLC16A2P36021 539 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 BACE1P56817 501 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 CDC37Q16543 378 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 QRICH1Q2TAL8 776 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 FOXD4L6Q3SYB3 417 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 KIAA1755Q5JYT7 1200 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 FAM83BQ5T0W9 1011 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 ANO1Q5XXA6 986 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 FOXD4L3Q6VB84 417 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 ARMC9Q7Z3E5 817 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 LDHDQ86WU2 507 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 ANKRD13AQ8IZ07 590 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 KLHL23Q8NBE8 558 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 KCNG4Q8TDN1 519 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 USP28Q96RU2 1077 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 NUP88Q99567 741 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 EIF3CQ99613 913 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 GLIS2Q9BZE0 524 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 RANBP17Q9H2T7 1088 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 PRR12Q9ULL5 1215 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 CEP131Q9UPN4 1083 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 SNCAIPQ9Y6H5 919 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 PNMA6AP0CW24 399 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 IKQ13123 557 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 VGLL4Q14135 290 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 TYW1BQ6NUM6 668 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 KRT25Q7Z3Z0 450 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 GIMAP7Q8NHV1 300 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 OXER1Q8TDS5 423 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 ZKSCAN4Q969J2 545 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 CHAMP1Q96JM3 812 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 AMNQ9BXJ7 453 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 UBXN6Q9BZV1 441 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 RIC8AQ9NPQ8 531 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 TFIP11Q9UBB9 837 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 AFG3L2Q9Y4W6 797 aa8.13□□□□□ -1.11
SMARCE1-211ENST00000493660 MYPNQ86TC9 1320 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 SMCO2A6NFE2 343 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 PPP6R2O75170 966 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 ADCY7P51828 1080 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 FKBP1BP68106 108 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 NR5A1Q13285 461 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 ORC2Q13416 577 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 MTMR2Q13614 643 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 NAA30Q147X3 362 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 STK38Q15208 465 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 LEKR1Q6ZMV7 388 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 FBXO11Q86XK2 927 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 SPICE1Q8N0Z3 855 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 LINC00301Q8NCQ3 95 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 TSPAN18Q96SJ8 248 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 SH3GL3Q99963 347 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 FAM107BQ9H098 131 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 GDPD2Q9HCC8 539 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 EMILIN3Q9NT22 766 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 PPP1R11O60927 126 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 VCAM1P19320 739 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 PAX7P23759 505 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 MRPL12P52815 198 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 PPATQ06203 517 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 SPP2Q13103 211 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 SLC39A14Q15043 492 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 ZYXQ15942 572 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 CCDC186Q7Z3E2 898 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 CCDC84Q86UT8 332 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 ERO1BQ86YB8 467 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 PRPF38AQ8NAV1 312 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 CUL5Q93034 780 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 SLF1Q9BQI6 1058 aa8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-211ENST00000493660 TMOD4Q9NZQ9 345 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms