RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 RPS6KB1P23443 525 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 ADD1P35611 737 aaKnown RBP10.92□□□□□ -0.66
SGIP1-213ENST00000493564 GJA9P57773 515 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 RTP1P59025 263 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 RTN1Q16799 776 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 TRIM60Q495X7 471 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 CCSAPQ6IQ19 270 aaPredicted RBP10.92□□□□□ -0.66
SGIP1-213ENST00000493564 TMTC3Q6ZXV5 915 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 DNERQ8NFT8 737 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 NSUN6Q8TEA1 469 aaKnown RBP10.92□□□□□ -0.66
SGIP1-213ENST00000493564 COPS5Q92905 334 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 MPHOSPH6Q99547 160 aaKnown RBP10.92□□□□□ -0.66
SGIP1-213ENST00000493564 AP5M1Q9H0R1 490 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 SEC63Q9UGP8 760 aaKnown RBP10.92□□□□□ -0.66
SGIP1-213ENST00000493564 PHF24Q9UPV7 400 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 FRMPD3Q5JV73 1810 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 GOLGA8AA7E2F4 631 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 GOLGA8BA8MQT2 603 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 B4DLN1 442 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 CTAGE5O15320 804 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 SEC24BO95487 1268 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 ASGR1P07306 291 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 TXNP10599 105 aaKnown RBP10.91□□□□□ -0.66
SGIP1-213ENST00000493564 EDNRBP24530 442 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 PSMA5P28066 241 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 SMARCA1P28370 1054 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 CDC27P30260 824 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 HSD17B4P51659 736 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 MRPL12P52815 198 aaKnown RBP10.91□□□□□ -0.66
SGIP1-213ENST00000493564 STXBP2Q15833 593 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 USP17L6PQ6QN14 398 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 TLK2Q86UE8 772 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 GPKOWQ92917 476 aaPredicted RBP eCLIP10.91□□□□□ -0.66
SGIP1-213ENST00000493564 UPF3AQ9H1J1 476 aaKnown RBP10.91□□□□□ -0.66
SGIP1-213ENST00000493564 STARD7Q9NQZ5 370 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 PXMP2Q9NR77 195 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 FAM217BQ9NTX9 383 aaPredicted RBP10.91□□□□□ -0.66
SGIP1-213ENST00000493564 V9GY48 417 aaPredicted RBP10.91□□□□□ -0.66
SGIP1-213ENST00000493564 ALPK3Q96L96 1907 aa10.91□□□□□ -0.66
SGIP1-213ENST00000493564 RBM47A0AV96 593 aaKnown RBP10.9□□□□□ -0.66
SGIP1-213ENST00000493564 SORBS3O60504 671 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 PQBP1O60828 265 aaKnown RBP10.9□□□□□ -0.66
SGIP1-213ENST00000493564 ARIH2O95376 493 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 NR3C2P08235 984 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 METAP2P50579 478 aaKnown RBP eCLIP10.9□□□□□ -0.66
SGIP1-213ENST00000493564 CCT2P78371 535 aaKnown RBP10.9□□□□□ -0.66
SGIP1-213ENST00000493564 TLE2Q04725 743 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 TRAF1Q13077 416 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 FSCN1Q16658 493 aaKnown RBP10.9□□□□□ -0.66
SGIP1-213ENST00000493564 LY6KQ17RY6 165 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 DUSP28Q4G0W2 176 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 CXCL17Q6UXB2 119 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 RUFY3Q7L099 469 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 HEATR3Q7Z4Q2 680 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 PCSK9Q8NBP7 692 aaKnown RBP10.9□□□□□ -0.66
SGIP1-213ENST00000493564 OR6J1Q8NGC5 347 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 IL31RAQ8NI17 732 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 TSEN34Q9BSV6 310 aaKnown RBP10.9□□□□□ -0.66
SGIP1-213ENST00000493564 UPF3BQ9BZI7 483 aaKnown RBP10.9□□□□□ -0.66
SGIP1-213ENST00000493564 ZSWIM6Q9HCJ5 1215 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 PRDM5Q9NQX1 630 aaPredicted RBP10.9□□□□□ -0.66
SGIP1-213ENST00000493564 RBM28Q9NW13 759 aaKnown RBP10.9□□□□□ -0.66
SGIP1-213ENST00000493564 RTEL1Q9NZ71 1219 aa10.9□□□□□ -0.66
SGIP1-213ENST00000493564 RBM27Q9P2N5 1060 aaKnown RBP10.9□□□□□ -0.66
SGIP1-213ENST00000493564 LOC102724159A0A0B4J2E5 919 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 MOXD2PA6NHM9 499 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 EIF3JO75822 258 aaKnown RBP10.89□□□□□ -0.67
SGIP1-213ENST00000493564 PSMC6P62333 389 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 MDM2Q00987 491 aaPredicted RBP10.89□□□□□ -0.67
SGIP1-213ENST00000493564 TTLL4Q14679 1199 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 PGM5Q15124 567 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 PPP2R5BQ15173 497 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 PWP2Q15269 919 aaKnown RBP10.89□□□□□ -0.67
SGIP1-213ENST00000493564 SH3RF1Q7Z6J0 888 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 SMARCC2Q8TAQ2 1214 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 SCFD2Q8WU76 684 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 PPP1R13LQ8WUF5 828 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 GLT1D1Q96MS3 346 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 IWS1Q96ST2 819 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 PDCD2LQ9BRP1 358 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 MAF1Q9H063 256 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 PSTPIP2Q9H939 334 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 MAP3K20Q9NYL2 800 aaKnown RBP10.89□□□□□ -0.67
SGIP1-213ENST00000493564 CYP46A1Q9Y6A2 500 aa10.89□□□□□ -0.67
SGIP1-213ENST00000493564 CNTNAP5Q8WYK1 1306 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 TRIM43BA6NCK2 446 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 MEIS2O14770 477 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 EPB41L2O43491 1005 aaKnown RBP10.88□□□□□ -0.67
SGIP1-213ENST00000493564 MYL3P08590 195 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 CST5P28325 142 aaPredicted RBP10.88□□□□□ -0.67
SGIP1-213ENST00000493564 MAGEA10P43363 369 aaPredicted RBP10.88□□□□□ -0.67
SGIP1-213ENST00000493564 CHMP4BP1P59074 171 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 GHRHRQ02643 423 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 FUT2Q10981 343 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 TOB2Q14106 344 aaPredicted RBP10.88□□□□□ -0.67
SGIP1-213ENST00000493564 SNX17Q15036 470 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 UBE2SQ16763 222 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 HABP4Q5JVS0 413 aaKnown RBP10.88□□□□□ -0.67
SGIP1-213ENST00000493564 WWC2Q6AWC2 1192 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 TYW1BQ6NUM6 668 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms