RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 RASA1P20936 1047 aa11.45□□□□□ -0.58
PRPF3-206ENST00000493553 SNW1Q13573 536 aaKnown RBP11.45□□□□□ -0.58
PRPF3-206ENST00000493553 STK11IPQ8N1F8 1099 aa11.45□□□□□ -0.58
PRPF3-206ENST00000493553 GTPBP3Q969Y2 492 aaKnown RBP11.45□□□□□ -0.58
PRPF3-206ENST00000493553 ZDHHC15Q96MV8 337 aa11.45□□□□□ -0.58
PRPF3-206ENST00000493553 SERPINA10Q9UK55 444 aa11.45□□□□□ -0.58
PRPF3-206ENST00000493553 JAG2Q9Y219 1238 aa11.45□□□□□ -0.58
PRPF3-206ENST00000493553 CLIC4Q9Y696 253 aa11.45□□□□□ -0.58
PRPF3-206ENST00000493553 A6NJY4 79 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 BTBD18B2RXH4 712 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 CDK2AP1O14519 115 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 BACH1O14867 736 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 CYP2D6P10635 497 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 MSNP26038 577 aaKnown RBP11.44□□□□□ -0.58
PRPF3-206ENST00000493553 SYKP43405 635 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 NOVP48745 357 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 ZNF165P49910 485 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 NLRP5P59047 1200 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 ORC2Q13416 577 aaPredicted RBP11.44□□□□□ -0.58
PRPF3-206ENST00000493553 LBRQ14739 615 aaKnown RBP11.44□□□□□ -0.58
PRPF3-206ENST00000493553 PTPAQ15257 358 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 CAMK4Q16566 473 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 FAM47AQ5JRC9 791 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 AXDND1Q5T1B0 1012 aaPredicted RBP11.44□□□□□ -0.58
PRPF3-206ENST00000493553 RESP18Q5W5W9 173 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 RCSD1Q6JBY9 416 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.44□□□□□ -0.58
PRPF3-206ENST00000493553 TEX2Q8IWB9 1127 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 TRERF1Q96PN7 1200 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 SPZ1Q9BXG8 430 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 NIFKQ9BYG3 293 aaKnown RBP11.44□□□□□ -0.58
PRPF3-206ENST00000493553 GPAMQ9HCL2 828 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 USP40Q9NVE5 1235 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 SERPINB13Q9UIV8 391 aa11.44□□□□□ -0.58
PRPF3-206ENST00000493553 SRPRBQ9Y5M8 271 aaKnown RBP11.44□□□□□ -0.58
PRPF3-206ENST00000493553 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 CNTNAP5Q8WYK1 1306 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 SMTNL1A8MU46 457 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 BECN2A8MW95 431 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 LAD1O00515 517 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 DTNBO60941 627 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 ZNF202O95125 648 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 PARP1P09874 1014 aaKnown RBP11.43□□□□□ -0.58
PRPF3-206ENST00000493553 MSX1P28360 303 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 SRSF11Q05519 484 aaKnown RBP11.43□□□□□ -0.58
PRPF3-206ENST00000493553 KIAA2012Q0VF49 1180 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 PKN1Q16512 942 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 ASPRV1Q53RT3 343 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 CT47A1Q5JQC4 288 aaPredicted RBP11.43□□□□□ -0.58
PRPF3-206ENST00000493553 CKAP2LQ8IYA6 745 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 ZNF295-AS1Q8N0V1 137 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 DAGLBQ8NCG7 672 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 AIFM3Q96NN9 605 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 GPR101Q96P66 508 aaPredicted RBP11.43□□□□□ -0.58
PRPF3-206ENST00000493553 BPIFA3Q9BQP9 254 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 GLT8D2Q9H1C3 349 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 SEC63Q9UGP8 760 aaKnown RBP11.43□□□□□ -0.58
PRPF3-206ENST00000493553 SYNPO2Q9UMS6 1093 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 STX8Q9UNK0 236 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 MRVI1Q9Y6F6 885 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 LAMB1P07942 1786 aa11.43□□□□□ -0.58
PRPF3-206ENST00000493553 PALM3A6NDB9 673 aaPredicted RBP11.42□□□□□ -0.58
PRPF3-206ENST00000493553 GPR25O00155 361 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 THBS1P07996 1170 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 PFKFB1P16118 471 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 GNA11P29992 359 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 PLA2G4AP47712 749 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 ATP1A2P50993 1020 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 NDUFA8P51970 172 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 GRIK5Q16478 980 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 ANO6Q4KMQ2 910 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 CCDC93Q567U6 631 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 ARL6IP4Q66PJ3 421 aaKnown RBP11.42□□□□□ -0.58
PRPF3-206ENST00000493553 FOXP4Q8IVH2 680 aaPredicted RBP11.42□□□□□ -0.58
PRPF3-206ENST00000493553 CCDC82Q8N4S0 544 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 SRBD1Q8N5C6 995 aaKnown RBP11.42□□□□□ -0.58
PRPF3-206ENST00000493553 TTLL6Q8N841 843 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 RRP36Q96EU6 259 aaKnown RBP11.42□□□□□ -0.58
PRPF3-206ENST00000493553 PSMD1Q99460 953 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 TMEM47Q9BQJ4 181 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 IDI2Q9BXS1 227 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 ZNF358Q9NW07 568 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 SAP30BPQ9UHR5 308 aaKnown RBP11.42□□□□□ -0.58
PRPF3-206ENST00000493553 KCNH3Q9ULD8 1083 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 HPSEQ9Y251 543 aa11.42□□□□□ -0.58
PRPF3-206ENST00000493553 ECE2O60344 883 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 ENTPD3O75355 529 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 SMC2O95347 1197 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 PLEKHA8P1O95397 391 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 ADCY5O95622 1261 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 TTLL1O95922 423 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 GUCY1A2P33402 732 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 CRKP46108 304 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 PLCD1P51178 756 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 GABPAQ06546 454 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 TRAF1Q13077 416 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 GPATCH4Q5T3I0 446 aaKnown RBP11.41□□□□□ -0.58
PRPF3-206ENST00000493553 MCTP2Q6DN12 878 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 PGBD3Q8N328 593 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 TRIML1Q8N9V2 468 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms