RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 FSIP1Q8NA03 581 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 NAP1L4Q99733 375 aaKnown RBP15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 RNF146Q9NTX7 359 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 RIPK3Q9Y572 518 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 CCL15-CCL14A0A0B4J2E2 113 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 ESPNB1AK53 854 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 NEMFO60524 1076 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 GCFC2P16383 781 aaKnown RBP15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 CMA1P23946 247 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 SREBF1P36956 1147 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 ARHGAP4P98171 946 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 CCL15Q16663 113 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 TKFCQ3LXA3 575 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 PPP4R3AQ6IN85 833 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 C4orf32Q8N8J7 132 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 ZNF579Q8NAF0 562 aaKnown RBP15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 ANP32BQ92688 251 aaKnown RBP15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 CLIC6Q96NY7 704 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 EHMT1Q9H9B1 1298 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 PNMA3Q9UL41 463 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 EDIL3O43854 480 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 CRYGNQ8WXF5 182 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 TMEM63CQ9P1W3 806 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 SLC45A1Q9Y2W3 748 aa15.98■□□□□ 0.15
PDZRN3-210ENST00000492909 TDP2O95551 362 aa15.97■□□□□ 0.15
PDZRN3-210ENST00000492909 PRPHP41219 470 aa15.97■□□□□ 0.15
PDZRN3-210ENST00000492909 NOGQ13253 232 aa15.97■□□□□ 0.15
PDZRN3-210ENST00000492909 SHC4Q6S5L8 630 aa15.97■□□□□ 0.15
PDZRN3-210ENST00000492909 POTEEQ6S8J3 1075 aa15.97■□□□□ 0.15
PDZRN3-210ENST00000492909 MOXD1Q6UVY6 613 aa15.97■□□□□ 0.15
PDZRN3-210ENST00000492909 TMEM60Q9H2L4 133 aa15.97■□□□□ 0.15
PDZRN3-210ENST00000492909 GOLPH3LQ9H4A5 285 aa15.97■□□□□ 0.15
PDZRN3-210ENST00000492909 BTBD7Q9P203 1132 aa15.97■□□□□ 0.15
PDZRN3-210ENST00000492909 A0A1B0GVL5 298 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 VWA3AA6NCI4 1184 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 NR1I2O75469 434 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 OR52Z1P0C646 297 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 GRIN1Q05586 938 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 FAM160A1Q05DH4 1040 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 RESP18Q5W5W9 173 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 LRSAM1Q6UWE0 723 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 NSMFQ6X4W1 530 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 RNF207Q6ZRF8 634 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 ANKRD23Q86SG2 305 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 BRI3BPQ8WY22 251 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 MAF1Q9H063 256 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 CSRNP2Q9H175 543 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 ACAD9Q9H845 621 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 DACT1Q9NYF0 836 aa15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 DDX25Q9UHL0 483 aaKnown RBP15.96■□□□□ 0.15
PDZRN3-210ENST00000492909 BTBD19C9JJ37 291 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 PDHXO00330 501 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 RPS6P62753 249 aaKnown RBP15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 CALCRLQ16602 461 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 DTHD1Q6ZMT9 781 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 RIOX2Q8IUF8 465 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 CHST13Q8NET6 341 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 ENGASEQ8NFI3 743 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 GTF3C2Q8WUA4 911 aaPredicted RBP15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 PAGR1Q9BTK6 254 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 SPATC1LQ9H0A9 340 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 RBSNQ9H1K0 784 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 DDX19AQ9NUU7 478 aaKnown RBP15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 RABGAP1Q9Y3P9 1069 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 CYP3A7-CYP3A51PA0A087WV96 503 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 SLC37A4O43826 429 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 CYP3A4P08684 503 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 PFKFB1P16118 471 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 CYP3A7P24462 503 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 NDUFA8P51970 172 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 SNW1Q13573 536 aaKnown RBP15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 CCDC183Q5T5S1 534 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 SYTL5Q8TDW5 730 aaPredicted RBP15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 FAM13BQ9NYF5 915 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 COL20A1Q9P218 1284 aa15.95■□□□□ 0.14
PDZRN3-210ENST00000492909 FAM237AA0A1B0GTK4 181 aa15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 CIITAP33076 1130 aa15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 MAP2K2P36507 400 aa15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 LONP1P36776 959 aaKnown RBP15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 IL17AQ16552 155 aa15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 SPECC1Q5M775 1068 aa15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 SLC30A10Q6XR72 485 aa15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 SMCR8Q8TEV9 937 aaPredicted RBP15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 MBOAT7Q96N66 472 aa15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 RBPJLQ9UBG7 517 aa15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 FBXO40Q9UH90 709 aa15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 HPSEQ9Y251 543 aa15.94■□□□□ 0.14
PDZRN3-210ENST00000492909 PEX10O60683 326 aa15.93■□□□□ 0.14
PDZRN3-210ENST00000492909 KINO60870 393 aaKnown RBP15.93■□□□□ 0.14
PDZRN3-210ENST00000492909 CNMDO75829 334 aa15.93■□□□□ 0.14
PDZRN3-210ENST00000492909 CYP2C8P10632 490 aa15.93■□□□□ 0.14
PDZRN3-210ENST00000492909 ZNF76P36508 570 aa15.93■□□□□ 0.14
PDZRN3-210ENST00000492909 BAATQ14032 418 aaPredicted RBP15.93■□□□□ 0.14
PDZRN3-210ENST00000492909 FMR1NBQ8N0W7 255 aaPredicted RBP15.93■□□□□ 0.14
PDZRN3-210ENST00000492909 MTMR9Q96QG7 549 aa15.93■□□□□ 0.14
PDZRN3-210ENST00000492909 PTPN18Q99952 460 aa15.93■□□□□ 0.14
PDZRN3-210ENST00000492909 THSD7BQ9C0I4 1608 aa15.93■□□□□ 0.14
PDZRN3-210ENST00000492909 RPTORQ8N122 1335 aa15.93■□□□□ 0.14
PDZRN3-210ENST00000492909 SLC25A27O95847 323 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms