RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 UNC13DQ70J99 1090 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 ZBTB9Q96C00 473 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 FAM163AQ96GL9 167 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 RPGRIP1Q96KN7 1286 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 CAPZA3Q96KX2 299 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 LRWD1Q9UFC0 647 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 PLAGL2Q9UPG8 496 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 PVALEFA0A1B0GWK0 134 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 hCG_1984214I3L0E3 225 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 PLEKP08567 350 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 VWA3BQ502W6 1294 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 ZNF713Q8N859 430 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 IQCDQ96DY2 449 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 GAKO14976 1311 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 FRMPD2Q68DX3 1309 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 EPHB6O15197 1021 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 CKAP4Q07065 602 aaKnown RBP17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 MUM1L1Q5H9M0 696 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 TRAPPC3LQ5T215 181 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 LARP4BQ92615 738 aaKnown RBP17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 NDST4Q9H3R1 872 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 FAN1Q9Y2M0 1017 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 PLIN4Q96Q06 1357 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 MACROD2A1Z1Q3 448 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 TARSL2A2RTX5 802 aaKnown RBP17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 PDE2AO00408 941 aaPredicted RBP17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 TDP2O95551 362 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 LMAN1P49257 510 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 KRT26Q7Z3Y9 468 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 COA7Q96BR5 231 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 CCDC42Q96M95 316 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 ARHGAP20Q9P2F6 1191 aa17.95■□□□□ 0.46
SEMA4D-220ENST00000492386 LTBP4Q8N2S1 1624 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 ZNF185O15231 689 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 ADCY7P51828 1080 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 KIF5AQ12840 1032 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 MFSD14BQ5SR56 506 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 PRR5LQ6MZQ0 368 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 DYMQ7RTS9 669 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 GUF1Q8N442 669 aaKnown RBP17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 RPGRQ92834 1020 aaKnown RBP17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 NUDT12Q9BQG2 462 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 POTEMA6NI47 508 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 IDEP14735 1019 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 ATP2B4P23634 1241 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 FAM182BQ5T319 152 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 FAM71BQ8TC56 605 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 RAD54LQ92698 747 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 SECISBP2LQ93073 1101 aaKnown RBP17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 TSGA10Q9BZW7 698 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 VIPAS39Q9H9C1 493 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 MTMR4Q9NYA4 1195 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 ABCB11O95342 1321 aa17.94■□□□□ 0.46
SEMA4D-220ENST00000492386 EHHADHQ08426 723 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 PDIA5Q14554 519 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 SPA17Q15506 151 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 MAN2A1Q16706 1144 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 TMEM266Q2M3C6 531 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 CRY2Q49AN0 593 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 FAM207AQ9NSI2 230 aaPredicted RBP17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 GGA1Q9UJY5 639 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 LCA5LO95447 670 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 SNHG28P0DPA3 235 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 MCM3P25205 808 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 ZSCAN26Q16670 478 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 ASPRV1Q53RT3 343 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 LRRC55Q6ZSA7 311 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 KCNK18Q7Z418 384 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 C2CD5Q86YS7 1000 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 CERKQ8TCT0 537 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 CDK5RAP3Q96JB5 506 aa17.93■□□□□ 0.46
SEMA4D-220ENST00000492386 LRRC63Q05C16 580 aa17.92■□□□□ 0.46
SEMA4D-220ENST00000492386 TMEM119Q4V9L6 283 aa17.92■□□□□ 0.46
SEMA4D-220ENST00000492386 SLF2Q8IX21 1173 aa17.92■□□□□ 0.46
SEMA4D-220ENST00000492386 LRRC47Q8N1G4 583 aaKnown RBP17.92■□□□□ 0.46
SEMA4D-220ENST00000492386 SMCR8Q8TEV9 937 aaPredicted RBP17.92■□□□□ 0.46
SEMA4D-220ENST00000492386 CCDC102AQ96A19 550 aa17.92■□□□□ 0.46
SEMA4D-220ENST00000492386 IFIH1Q9BYX4 1025 aaKnown RBP17.92■□□□□ 0.46
SEMA4D-220ENST00000492386 SH2D4AQ9H788 454 aa17.92■□□□□ 0.46
SEMA4D-220ENST00000492386 MED4Q9NPJ6 270 aa17.92■□□□□ 0.46
SEMA4D-220ENST00000492386 PCDHA13Q9Y5I0 950 aa17.92■□□□□ 0.46
SEMA4D-220ENST00000492386 AARSP49588 968 aaKnown RBP eCLIP17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 KIF11P52732 1056 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 CCDC96Q2M329 555 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 FNBP4Q8N3X1 1017 aaPredicted RBP17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 CAGE1Q8TC20 777 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 C8orf37Q96NL8 207 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 ACBD3Q9H3P7 528 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 JADE2Q9NQC1 790 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 CAPN6Q9Y6Q1 641 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 MYH10P35580 1976 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 MYH7BA7E2Y1 1941 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 IGKV6D-41A0A0C4DH26 115 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 TULP2O00295 520 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 EIF4A3P38919 411 aaKnown RBP17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 GABPAQ06546 454 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 HSP90B2PQ58FF3 399 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 FAM196AQ6ZSG2 479 aa17.91■□□□□ 0.46
SEMA4D-220ENST00000492386 CCDC84Q86UT8 332 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms