RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 CALM3P0DP25 149 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 SMPD1P17405 629 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 BEX3Q00994 111 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 GRM4Q14833 912 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 TMEM63BQ5T3F8 832 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 NSMFQ6X4W1 530 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 FBXO16Q8IX29 292 aaPredicted RBP17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 CDX2Q99626 313 aaPredicted RBP17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 UPF3BQ9BZI7 483 aaKnown RBP17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 SEMA6BQ9H3T3 888 aa17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 FRMPD2Q68DX3 1309 aaPredicted RBP17.44■□□□□ 0.38
CDC42SE1-205ENST00000491825 LCTP09848 1927 aa17.43■□□□□ 0.38
CDC42SE1-205ENST00000491825 CD4P01730 458 aa17.43■□□□□ 0.38
CDC42SE1-205ENST00000491825 PARP1P09874 1014 aaKnown RBP17.43■□□□□ 0.38
CDC42SE1-205ENST00000491825 EVCP57679 992 aa17.43■□□□□ 0.38
CDC42SE1-205ENST00000491825 MFSD5Q6N075 450 aa17.43■□□□□ 0.38
CDC42SE1-205ENST00000491825 APOA5Q6Q788 366 aa17.43■□□□□ 0.38
CDC42SE1-205ENST00000491825 NFXL1Q6ZNB6 911 aa17.43■□□□□ 0.38
CDC42SE1-205ENST00000491825 Q6ZUG5 572 aa17.43■□□□□ 0.38
CDC42SE1-205ENST00000491825 TBC1D32Q96NH3 1257 aa17.43■□□□□ 0.38
CDC42SE1-205ENST00000491825 ALDH8A1Q9H2A2 487 aaPredicted RBP17.43■□□□□ 0.38
CDC42SE1-205ENST00000491825 SLC12A7Q9Y666 1083 aa17.43■□□□□ 0.38
CDC42SE1-205ENST00000491825 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 FGD1P98174 961 aa17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 BAATQ14032 418 aaPredicted RBP17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 FSCN1Q16658 493 aaKnown RBP17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 CXCL17Q6UXB2 119 aa17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 C16orf59Q7L2K0 433 aa17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 EEPD1Q7L9B9 569 aa17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 CLEC4DQ8WXI8 215 aa17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 KIF2CQ99661 725 aa17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.42■□□□□ 0.383e-12■□□□□ 9.2
CDC42SE1-205ENST00000491825 VTA1Q9NP79 307 aa17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 GPCPD1Q9NPB8 672 aa17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 MAD2L2Q9UI95 211 aa17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 Q9Y3F1 56 aa17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 GRIN2DO15399 1336 aa17.42■□□□□ 0.38
CDC42SE1-205ENST00000491825 SPTBN5Q9NRC6 3674 aaKnown RBP17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 TMEM265A0A087WTH1 108 aa17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 CABYRO75952 493 aa17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 KIF5BP33176 963 aa17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 ALDH5A1P51649 535 aaPredicted RBP17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 TOB2Q14106 344 aaPredicted RBP17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 RASIP1Q5U651 963 aa17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 IQSEC1Q6DN90 963 aa17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 SLC30A10Q6XR72 485 aa17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 NOL8Q76FK4 1167 aaKnown RBP17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 IL27Q8NEV9 243 aa17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 CTCFLQ8NI51 663 aaPredicted RBP17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 BRF1Q92994 677 aa17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 VTI1AQ96AJ9 217 aa17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 PDRG1Q9NUG6 133 aa17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 BRPF3Q9ULD4 1205 aa17.41■□□□□ 0.38
CDC42SE1-205ENST00000491825 LOC102724159A0A0B4J2E5 919 aa17.4■□□□□ 0.38
CDC42SE1-205ENST00000491825 KLF18A0A0U1RQI7 1052 aa17.4■□□□□ 0.38
CDC42SE1-205ENST00000491825 DYNC1LI2O43237 492 aaPredicted RBP17.4■□□□□ 0.38
CDC42SE1-205ENST00000491825 GOLGA8HP0CJ92 632 aa17.4■□□□□ 0.38
CDC42SE1-205ENST00000491825 PWP2Q15269 919 aaKnown RBP17.4■□□□□ 0.38
CDC42SE1-205ENST00000491825 SYNE3Q6ZMZ3 975 aa17.4■□□□□ 0.38
CDC42SE1-205ENST00000491825 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
CDC42SE1-205ENST00000491825 ADD3Q9UEY8 706 aaKnown RBP17.4■□□□□ 0.38
CDC42SE1-205ENST00000491825 PRUNE2Q8WUY3 3088 aa17.4■□□□□ 0.38
CDC42SE1-205ENST00000491825 CUL9Q8IWT3 2517 aa17.4■□□□□ 0.38
CDC42SE1-205ENST00000491825 RBM47A0AV96 593 aaKnown RBP17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 KLRF2D3W0D1 207 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 ZBTB43O43298 467 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 CSF2RAP15509 400 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 EDNRBP24530 442 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 SMARCA1P28370 1054 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 PPIGQ13427 754 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 PPP2R5BQ15173 497 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 ANKRD1Q15327 319 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 DUSP28Q4G0W2 176 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 TMEM240Q5SV17 173 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 STAG2Q8N3U4 1231 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 LZTS2Q9BRK4 669 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 MYL10Q9BUA6 226 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 PPP1R12CQ9BZL4 782 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 AP5M1Q9H0R1 490 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 PNMA2Q9UL42 364 aa17.39■□□□□ 0.37
CDC42SE1-205ENST00000491825 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 PTPDC1A2A3K4 754 aa17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 TLR3O15455 904 aaKnown RBP17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 DNAJB2P25686 324 aa17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 GNAQP50148 359 aa17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 RPS6P62753 249 aaKnown RBP17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 APOBRQ0VD83 1088 aa17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 ITGA7Q13683 1181 aa17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 FANCBQ8NB91 859 aa17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 MYLIPQ8WY64 445 aa17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 RBM28Q9NW13 759 aaKnown RBP17.38■□□□□ 0.37
CDC42SE1-205ENST00000491825 GOLGA8BA8MQT2 603 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 CALML3P27482 149 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 NEK4P51957 841 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 RABEP1Q15276 862 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 RNF207Q6ZRF8 634 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 ADGRF4Q8IZF3 695 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 TMEM199Q8N511 208 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms