RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 UPF3AQ9H1J1 476 aaKnown RBP15.8■□□□□ 0.12
CDK9-204ENST00000491521 TMEM39AQ9NV64 488 aa15.8■□□□□ 0.12
CDK9-204ENST00000491521 BRPF3Q9ULD4 1205 aa15.8■□□□□ 0.12
CDK9-204ENST00000491521 TPCN1Q9ULQ1 816 aa15.8■□□□□ 0.12
CDK9-204ENST00000491521 K7ELQ4 463 aaPredicted RBP15.79■□□□□ 0.12
CDK9-204ENST00000491521 SMPD1P17405 629 aa15.79■□□□□ 0.12
CDK9-204ENST00000491521 C1orf53Q5VUE5 145 aa15.79■□□□□ 0.12
CDK9-204ENST00000491521 CCSAPQ6IQ19 270 aaPredicted RBP15.79■□□□□ 0.12
CDK9-204ENST00000491521 RAB11FIP4Q86YS3 637 aa15.79■□□□□ 0.12
CDK9-204ENST00000491521 ADGRF4Q8IZF3 695 aa15.79■□□□□ 0.12
CDK9-204ENST00000491521 ANKS1AQ92625 1134 aa15.79■□□□□ 0.12
CDK9-204ENST00000491521 ZNF274Q96GC6 653 aaPredicted RBP15.79■□□□□ 0.12
CDK9-204ENST00000491521 SLKQ9H2G2 1235 aaPredicted RBP15.79■□□□□ 0.12
CDK9-204ENST00000491521 ADD3Q9UEY8 706 aaKnown RBP15.79■□□□□ 0.12
CDK9-204ENST00000491521 COL6A3P12111 3177 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 GOLGA8BA8MQT2 603 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 DCDC2CA8MYV0 355 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 ZBTB43O43298 467 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 RAG1P15918 1043 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 PDIA3P30101 505 aaKnown RBP15.78■□□□□ 0.12
CDK9-204ENST00000491521 RPS6P62753 249 aaKnown RBP15.78■□□□□ 0.12
CDK9-204ENST00000491521 PDE4DQ08499 809 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 LRIT3Q3SXY7 679 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 ASPRV1Q53RT3 343 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 TAPT1Q6NXT6 567 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 Q7L0L9 218 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 SGMS1Q86VZ5 419 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 ZNF654Q8IZM8 581 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 TMX3Q96JJ7 454 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 MYL10Q9BUA6 226 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 VTA1Q9NP79 307 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 PNMA2Q9UL42 364 aa15.78■□□□□ 0.12
CDK9-204ENST00000491521 CTAGE5O15320 804 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 HSP90AA1P07900 732 aaKnown RBP15.77■□□□□ 0.12
CDK9-204ENST00000491521 CALM1P0DP23 149 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 CALM2P0DP24 149 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 CALM3P0DP25 149 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 ITGB8P26012 769 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 CST5P28325 142 aaPredicted RBP15.77■□□□□ 0.12
CDK9-204ENST00000491521 CCT2P78371 535 aaKnown RBP15.77■□□□□ 0.12
CDK9-204ENST00000491521 FAAP100Q0VG06 881 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 SHHQ15465 462 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 FSCN1Q16658 493 aaKnown RBP15.77■□□□□ 0.12
CDK9-204ENST00000491521 ME3Q16798 604 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 QRICH1Q2TAL8 776 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 C9orf50Q5SZB4 431 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 IQSEC1Q6DN90 963 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 APOA5Q6Q788 366 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 CXCL17Q6UXB2 119 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 MICU3Q86XE3 530 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 STAG2Q8N3U4 1231 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 NECAB1Q8N987 351 aa15.77■□□□□ 0.12
CDK9-204ENST00000491521 SH2B1Q9NRF2 756 aaPredicted RBP15.77■□□□□ 0.12
CDK9-204ENST00000491521 GNEQ9Y223 722 aaKnown RBP15.77■□□□□ 0.12
CDK9-204ENST00000491521 A0A0U1RQG5 324 aaPredicted RBP15.76■□□□□ 0.11
CDK9-204ENST00000491521 GOLGA8AA7E2F4 631 aa15.76■□□□□ 0.11
CDK9-204ENST00000491521 LARGE1O95461 756 aa15.76■□□□□ 0.11
CDK9-204ENST00000491521 RXRAP19793 462 aa15.76■□□□□ 0.11
CDK9-204ENST00000491521 METAP2P50579 478 aaKnown RBP eCLIP15.76■□□□□ 0.11
CDK9-204ENST00000491521 EVCP57679 992 aa15.76■□□□□ 0.11
CDK9-204ENST00000491521 DEFB123Q8N688 67 aa15.76■□□□□ 0.11
CDK9-204ENST00000491521 TBC1D5Q92609 795 aa15.76■□□□□ 0.11
CDK9-204ENST00000491521 WDR11Q9BZH6 1224 aa15.76■□□□□ 0.11
CDK9-204ENST00000491521 ELP1O95163 1332 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 ABCB11O95342 1321 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 BAZ2BQ9UIF8 2168 aaKnown RBP15.75■□□□□ 0.11
CDK9-204ENST00000491521 ARVCFO00192 962 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 KIAA0355O15063 1070 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 ZEB2O60315 1214 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 PFKFB2O60825 505 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 ANKRD33Q7Z3H0 272 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 FBXO11Q86XK2 927 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 CCDC83Q8IWF9 413 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 FANCBQ8NB91 859 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 CTCFLQ8NI51 663 aaPredicted RBP15.75■□□□□ 0.11
CDK9-204ENST00000491521 MORC4Q8TE76 937 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 MPHOSPH6Q99547 160 aaKnown RBP15.75■□□□□ 0.11
CDK9-204ENST00000491521 JMJD4Q9H9V9 463 aa15.75■□□□□ 0.11
CDK9-204ENST00000491521 KLRF2D3W0D1 207 aa15.74■□□□□ 0.11
CDK9-204ENST00000491521 DDAH1O94760 285 aa15.74■□□□□ 0.11
CDK9-204ENST00000491521 PSMC6P62333 389 aa15.74■□□□□ 0.11
CDK9-204ENST00000491521 RTN1Q16799 776 aa15.74■□□□□ 0.11
CDK9-204ENST00000491521 HOMER1Q86YM7 354 aa15.74■□□□□ 0.11
CDK9-204ENST00000491521 OR6J1Q8NGC5 347 aa15.74■□□□□ 0.11
CDK9-204ENST00000491521 TOX2Q96NM4 488 aa15.74■□□□□ 0.11
CDK9-204ENST00000491521 NCOA5Q9HCD5 579 aaKnown RBP15.74■□□□□ 0.11
CDK9-204ENST00000491521 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
CDK9-204ENST00000491521 MROH7Q68CQ1 1323 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 CCDC196A0A1B0GTZ2 297 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 CPLX1O14810 134 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 TLR3O15455 904 aaKnown RBP15.73■□□□□ 0.11
CDK9-204ENST00000491521 MYL3P08590 195 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 KIF5BP33176 963 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 CDK7P50613 346 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 EPHB4P54760 987 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 FPGSQ05932 587 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 TROAPQ12815 778 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 DUSP28Q4G0W2 176 aa15.73■□□□□ 0.11
CDK9-204ENST00000491521 CPLX2Q6PUV4 134 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms