RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 MPHOSPH6Q99547 160 aaKnown RBP9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 TSPYL2Q9H2G4 693 aaPredicted RBP9.94□□□□□ -0.82
APOBEC3F-204ENST00000491387 PTPDC1A2A3K4 754 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 IQCF3P0C7M6 154 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 ACTN1P12814 892 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 MYOGP15173 224 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 IGFBP4P22692 258 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 PDE1AP54750 535 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 PPP2R5BQ15173 497 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 AAK1Q2M2I8 961 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 TMEM67Q5HYA8 995 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 GPATCH4Q5T3I0 446 aaKnown RBP9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 CCDC62Q6P9F0 684 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 ZNF589Q86UQ0 364 aaPredicted RBP9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 SESTD1Q86VW0 696 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 DGKHQ86XP1 1220 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 OR6J1Q8NGC5 347 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 PPM1EQ8WY54 764 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 UHRF1Q96T88 793 aaPredicted RBP9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 GPHNQ9NQX3 736 aaPredicted RBP9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 SUPT16HQ9Y5B9 1047 aaKnown RBP9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 SCN5AQ14524 2016 aa9.93□□□□□ -0.82
APOBEC3F-204ENST00000491387 TANC1Q9C0D5 1861 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 FRMPD2Q68DX3 1309 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 ZBBXA8MT70 800 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 BAIAP3O94812 1187 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 PARNO95453 639 aaKnown RBP9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 CA3P07451 260 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 MYL3P08590 195 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 TXNP10599 105 aaKnown RBP9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 COL9A1P20849 921 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 CALML3P27482 149 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 PDE4DQ08499 809 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 BFSP2Q13515 415 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 HDAC1Q13547 482 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 CCDC85BQ15834 202 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 RETREG2Q8NC44 543 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 CAGE1Q8TC20 777 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 ANKS1AQ92625 1134 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 CTAGE1Q96RT6 745 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 GPCPD1Q9NPB8 672 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 MTCH2Q9Y6C9 303 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 REV3LO60673 3130 aa9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 TRIP12Q14669 1992 aaPredicted RBP9.92□□□□□ -0.82
APOBEC3F-204ENST00000491387 GHRHRQ02643 423 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 NMIQ13287 307 aaPredicted RBP9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 GPNMBQ14956 572 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 CCDC178Q5BJE1 867 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 MFSD6Q6ZSS7 791 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 DEFB128Q7Z7B8 93 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 HERC6Q8IVU3 1022 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 AFAP1L1Q8TED9 768 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 COPS5Q92905 334 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 EMID1Q96A84 441 aaPredicted RBP9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 IWS1Q96ST2 819 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 IL25Q9H293 177 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 RNF41Q9H4P4 317 aaPredicted RBP9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 COG5Q9UP83 839 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 MTMR7Q9Y216 660 aa9.91□□□□□ -0.82
APOBEC3F-204ENST00000491387 PIEZO1Q92508 2521 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 ABCB11O95342 1321 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 CCDC171Q6TFL3 1326 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 EPOPA6NHQ4 379 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 KIF28PB7ZC32 967 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 GTPBP6O43824 516 aaPredicted RBP9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 ARIH2O95376 493 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 CXCL10P02778 98 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 PDE4AP27815 886 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 TAP1Q03518 808 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 RRP12Q5JTH9 1297 aaKnown RBP9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 TBC1D10CQ8IV04 446 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 SMC5Q8IY18 1101 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 CCDC155Q8N6L0 562 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 IL27Q8NEV9 243 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 NSUN6Q8TEA1 469 aaKnown RBP9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 ESR2Q92731 530 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 KAT2BQ92831 832 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 TOMM22Q9NS69 142 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 LMCD1Q9NZU5 365 aa9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 ZBTB47Q9UFB7 747 aaPredicted RBP9.9□□□□□ -0.82
APOBEC3F-204ENST00000491387 TCF20Q9UGU0 1960 aaKnown RBP9.9□□□□□ -0.83
APOBEC3F-204ENST00000491387 LPXNO60711 386 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 ARHGEF15O94989 841 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 GH1P01241 217 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 MMP3P08254 477 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 HOXD8P13378 290 aaPredicted RBP9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 SELPP16109 830 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 MFAP1P55081 439 aaKnown RBP9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 HAND2P61296 217 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 ARHGAP1Q07960 439 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 AAMPQ13685 434 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 PTGISQ16647 500 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 FAM47CQ5HY64 1035 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 SKAP1Q86WV1 359 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 MCF2L2Q86YR7 1114 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 PLEKHM2Q8IWE5 1019 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 SYTL5Q8TDW5 730 aaPredicted RBP9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 AFG1LQ8WV93 481 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 C1QTNF1Q9BXJ1 281 aa9.89□□□□□ -0.83
APOBEC3F-204ENST00000491387 OSBPL3Q9H4L5 887 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms